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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS13910 and DZA65_RS13915 are separated by 8 nucleotides
DZA65_RS13915 and DZA65_RS13920 are separated by 2 nucleotides
DZA65_RS13920 and DZA65_RS13925 are separated by 133 nucleotides
DZA65_RS13925 and DZA65_RS13930 are separated by 5 nucleotides
DZA65_RS13910: DZA65_RS13910 - flagellum-specific ATP synthase FliI, at 2,988,754 to 2,990,124
_RS13910
DZA65_RS13915: DZA65_RS13915 - flagella biosynthesis chaperone FliJ, at 2,990,133 to 2,990,573
_RS13915
DZA65_RS13920: DZA65_RS13920 - flagellar hook-length control protein FliK, at 2,990,576 to 2,991,907
_RS13920
DZA65_RS13925: DZA65_RS13925 - flagellar basal body-associated protein FliL, at 2,992,041 to 2,992,529
_RS13925
DZA65_RS13930: DZA65_RS13930 - flagellar motor switch protein FliM, at 2,992,535 to 2,993,551
_RS13930
Group
Condition
DZA65
_RS13910
DZA65
_RS13915
DZA65
_RS13920
DZA65
_RS13925
DZA65
_RS13930
plant
Stem-Atlantic
-3.4
-3.6
-2.8
-3.8
-3.6
plant
Stem-Atlantic
-3.2
-3.1
-2.8
-3.5
-3.6
plant
Stem-Atlantic
-3.4
-3.2
-3.0
-3.2
-3.3
plant
Stem-Upstate
-3.0
-3.4
-2.7
-3.0
-3.0
plant
Stem-Atlantic
-3.0
-2.9
-2.9
-3.2
-3.0
plant
Stem-Norland
-3.1
-2.9
-2.6
-2.7
-3.0
plant
Stem-Norland
-2.9
-2.8
-3.1
-2.4
-3.0
plant
Stem-Norland
-2.6
-3.0
-2.5
-3.0
-2.7
plant
Stem-Upstate
-2.7
-2.3
-2.6
-3.0
-2.8
plant
Stem-Upstate
-2.7
-3.0
-2.2
-2.5
-2.7
plant
Stem-Norland
-2.6
-2.5
-2.4
-3.1
-2.3
plant
Stem-Atlantic
-2.4
-2.4
-2.8
-2.2
-2.5
plant
Stem-Upstate
-2.5
-2.5
-2.1
-2.7
-2.6
plant
Stem-Norland
-2.6
-2.3
-2.2
-2.5
-2.7
plant
Stem-Atlantic
-2.3
-2.4
-2.6
-2.4
-2.5
plant
Stem-Norland
-2.2
-2.5
-2.3
-2.1
-2.6
plant
Stem-Norland
-1.9
-2.4
-1.9
-1.9
-2.0
plant
Stem-Atlantic
-1.7
-1.5
-2.1
-1.9
-1.9
plant
Stem-Upstate
-2.2
-1.9
-1.5
-1.5
-1.7
plant
Stem-Upstate
-1.7
-1.9
-1.6
-1.7
-1.8
plant
Stem-Norland
-1.2
-2.4
-1.7
-1.8
-1.6
plant
Stem-Upstate
-1.4
-1.9
-1.7
-1.3
-1.5
stress
1.88mM_PTB
+0.6
+0.6
+0.5
+0.5
+0.6
control
LB
+0.6
+0.5
+0.6
+0.7
+0.6
carbon source
M9+polygalacturonate
+0.7
+0.7
+0.6
+0.6
+0.7
carbon source
M9+polygalacturonate
+0.8
+0.7
+0.7
+0.6
+0.7
carbon source
M9+polygalacturonate
+0.8
+0.9
+0.8
+0.6
+0.8
carbon source
M9+glycerol
+1.2
+1.1
+1.2
+1.2
+1.3
carbon source
M9+glycerol
+1.3
+1.1
+1.3
+1.3
+1.3
carbon source
M9+glycerol
+1.4
+1.1
+1.3
+1.3
+1.4
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