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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS13875 and DZA65_RS13880 are separated by 104 nucleotides
DZA65_RS13880 and DZA65_RS13885 overlap by 1 nucleotides
DZA65_RS13885 and DZA65_RS13890 are separated by 190 nucleotides
DZA65_RS13890 and DZA65_RS13895 are separated by 332 nucleotides
DZA65_RS13875: DZA65_RS13875 - flagellar filament capping protein FliD, at 2,982,139 to 2,983,599
_RS13875
DZA65_RS13880: DZA65_RS13880 - flagellar export chaperone FliS, at 2,983,704 to 2,984,114
_RS13880
DZA65_RS13885: DZA65_RS13885 - flagellar protein FliT, at 2,984,114 to 2,984,476
_RS13885
DZA65_RS13890: DZA65_RS13890 - flagellar hook-basal body complex protein FliE, at 2,984,667 to 2,984,981
_RS13890
DZA65_RS13895: DZA65_RS13895 - flagellar basal body M-ring protein FliF, at 2,985,314 to 2,987,035
_RS13895
Group
Condition
DZA65
_RS13875
DZA65
_RS13880
DZA65
_RS13885
DZA65
_RS13890
DZA65
_RS13895
plant
Stem-Atlantic
-2.9
-2.8
-2.9
-4.8
-3.6
plant
Stem-Atlantic
-2.9
-3.0
-2.8
-4.1
-3.2
plant
Stem-Atlantic
-2.9
-3.7
-3.3
-2.8
-3.1
plant
Stem-Atlantic
-3.1
-3.8
-2.7
-3.3
-2.9
plant
Stem-Upstate
-3.0
-3.3
-3.0
-3.6
-2.6
plant
Stem-Norland
-3.0
-3.2
-2.4
-3.5
-2.9
plant
Stem-Upstate
-2.2
-3.0
-3.3
-3.1
-3.2
plant
Stem-Norland
-2.4
-3.2
-2.8
-3.6
-2.7
plant
Stem-Norland
-2.7
-2.4
-3.2
-3.5
-2.8
plant
Stem-Norland
-2.9
-2.6
-2.7
-3.3
-3.1
plant
Stem-Atlantic
-2.6
-3.2
-3.0
-2.8
-2.8
plant
Stem-Norland
-2.7
-2.9
-2.2
-2.7
-2.8
plant
Stem-Upstate
-2.2
-2.6
-2.8
-2.7
-2.6
plant
Stem-Atlantic
-2.3
-2.8
-3.0
-2.4
-2.2
plant
Stem-Norland
-2.3
-2.1
-2.7
-2.9
-2.3
plant
Stem-Upstate
-1.8
-1.8
-2.6
-3.1
-2.7
plant
Stem-Norland
-2.4
-2.5
-1.6
-3.2
-2.3
plant
Stem-Norland
-2.1
-2.0
-2.0
-4.0
-1.0
plant
Stem-Atlantic
-2.2
-2.5
-2.3
-1.9
-1.9
plant
Stem-Upstate
-1.9
-1.9
-2.2
-1.8
-1.8
plant
Stem-Upstate
-2.1
-2.0
-1.6
-1.5
-1.5
plant
Stem-Upstate
-1.9
-0.9
-2.1
-1.9
-1.8
plant
Atlantic
-1.1
-1.0
-0.5
-0.5
-0.5
plant
Atlantic
-1.1
-1.4
-0.4
-0.2
-0.1
plant
Atlantic
-1.1
-1.3
-0.4
-0.3
+0.2
carbon source
M9+sucrose
-0.9
-1.1
-0.5
+0.5
+0.5
carbon source
M9+glycerol
-1.0
-0.9
-0.5
+0.6
+0.6
carbon source
M9+glycerol
-1.0
-1.0
-0.5
+0.6
+0.6
carbon source
M9+glycerol
-1.2
-0.7
-0.4
+0.6
+0.6
carbon source
M9+glycerol
+0.1
+0.3
+0.0
+1.5
+1.4
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