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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS13830 and DZA65_RS13835 are separated by 54 nucleotides
DZA65_RS13835 and DZA65_RS13840 are separated by 392 nucleotides
DZA65_RS13840 and DZA65_RS13845 are separated by 103 nucleotides
DZA65_RS13845 and DZA65_RS13850 are separated by 191 nucleotides
DZA65_RS13830: DZA65_RS13830 - flagella biosynthesis regulatory protein FliZ, at 2,968,598 to 2,969,110
_RS13830
DZA65_RS13835: DZA65_RS13835 - RNA polymerase sigma factor FliA, at 2,969,165 to 2,969,887
_RS13835
DZA65_RS13840: DZA65_RS13840 - hypothetical protein, at 2,970,280 to 2,971,707
_RS13840
DZA65_RS13845: DZA65_RS13845 - FkbM family methyltransferase, at 2,971,811 to 2,972,896
_RS13845
DZA65_RS13850: DZA65_RS13850 - Gfo/Idh/MocA family oxidoreductase, at 2,973,088 to 2,974,221
_RS13850
Group
Condition
DZA65
_RS13830
DZA65
_RS13835
DZA65
_RS13840
DZA65
_RS13845
DZA65
_RS13850
plant
Stem-Norland
+0.1
-3.5
-1.0
-0.6
-1.7
plant
Stem-Atlantic
+0.2
-3.1
-1.2
-0.4
-1.4
plant
Stem-Atlantic
+0.8
-3.2
-1.0
-0.5
-1.7
plant
Stem-Norland
+0.8
-3.3
-0.8
-0.4
-1.2
plant
Stem-Norland
+0.2
-2.7
-0.8
-0.3
-1.3
plant
Stem-Atlantic
+0.6
-2.9
-0.8
+0.0
-1.4
plant
Stem-Upstate
+0.4
-2.8
-0.4
-0.1
-1.5
plant
Stem-Norland
+0.2
-2.3
-0.4
-0.3
-1.4
plant
Stem-Atlantic
+0.3
-2.4
-0.9
-0.1
-1.2
plant
Stem-Atlantic
+0.5
-2.5
-0.9
-0.1
-1.2
plant
Stem-Upstate
+1.0
-2.3
-1.3
+0.1
-1.3
plant
Stem-Norland
+0.4
-2.5
-0.4
-0.1
-1.0
plant
Stem-Atlantic
+0.5
-1.8
-1.0
-0.0
-1.0
plant
Stem-Norland
+0.9
-2.3
-0.4
-0.2
-1.2
plant
Stem-Upstate
+1.5
-2.3
-0.5
-0.2
-1.6
plant
Stem-Norland
+0.9
-1.3
-0.8
-0.4
-1.1
plant
Stem-Norland
+1.9
-2.3
-0.6
-0.0
-1.6
plant
Stem-Upstate
+1.5
-2.3
-0.8
+0.2
-1.1
plant
Stem-Atlantic
+0.8
-2.1
-0.2
+0.2
-1.1
plant
Stem-Upstate
+1.2
-2.2
-0.2
-0.3
-0.7
plant
Stem-Upstate
+0.5
-1.9
-0.2
-0.2
-0.5
plant
Stem-Upstate
+0.1
-1.4
-0.2
+0.1
-0.4
stress
1.88mM_PTB
+0.2
+0.5
+0.3
+0.1
-0.1
carbon source
M9+starch
+0.0
+0.5
-0.1
+0.3
+0.3
carbon source
M9+glycerol
-0.0
+0.6
+0.1
+0.3
+0.3
carbon source
M9+starch
+0.1
+0.6
-0.1
+0.2
+0.3
carbon source
M9+glycerol
+0.0
+1.1
-0.2
+0.1
+0.1
carbon source
M9+polygalacturonate
+0.2
+0.4
+0.1
+0.3
+0.1
carbon source
M9+glycerol
-0.0
+1.1
+0.1
+0.1
+0.1
carbon source
M9+glycerol
-0.0
+1.0
-0.0
+0.4
+0.3
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