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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS13420 and DZA65_RS13425 are separated by 664 nucleotides
DZA65_RS13425 and DZA65_RS13430 are separated by 177 nucleotides
DZA65_RS13430 and DZA65_RS13435 are separated by 301 nucleotides
DZA65_RS13435 and DZA65_RS13440 are separated by 551 nucleotides
DZA65_RS13420: DZA65_RS13420 - aminopeptidase N, at 2,875,819 to 2,878,434
_RS13420
DZA65_RS13425: DZA65_RS13425 - nicotinate phosphoribosyltransferase, at 2,879,099 to 2,880,304
_RS13425
DZA65_RS13430: DZA65_RS13430 - asparagine--tRNA ligase, at 2,880,482 to 2,881,882
_RS13430
DZA65_RS13435: DZA65_RS13435 - porin, at 2,882,184 to 2,883,314
_RS13435
DZA65_RS13440: DZA65_RS13440 - porin, at 2,883,866 to 2,884,954
_RS13440
Group
Condition
DZA65
_RS13420
DZA65
_RS13425
DZA65
_RS13430
DZA65
_RS13435
DZA65
_RS13440
plant
Stem-Atlantic
-0.1
-0.6
N.D.
-1.7
+0.2
plant
Stem-Upstate
-0.0
-0.6
N.D.
-1.7
+0.2
plant
Stem-Atlantic
-0.1
-0.3
N.D.
-1.8
+0.2
plant
Stem-Norland
-0.0
-0.1
N.D.
-1.9
+0.3
plant
Stem-Atlantic
-0.2
-0.1
N.D.
-1.7
+0.2
plant
Stem-Upstate
+0.1
-0.3
N.D.
-1.9
+0.5
plant
Stem-Upstate
+0.2
-0.2
N.D.
-1.7
+0.1
plant
Stem-Atlantic
-0.0
-0.2
N.D.
-1.5
+0.1
plant
Stem-Upstate
-0.1
-0.6
N.D.
-1.1
+0.5
plant
Stem-Norland
+0.0
-0.2
N.D.
-1.6
+0.3
plant
Stem-Norland
-0.0
+0.1
N.D.
-1.7
+0.3
plant
Stem-Norland
+0.0
-0.1
N.D.
-1.3
+0.1
plant
Stem-Norland
-0.0
+0.1
N.D.
-1.5
+0.2
carbon source
M9+starch
-0.1
-0.3
N.D.
-0.9
-0.0
plant
Norland
-0.3
-0.2
N.D.
-0.8
+0.1
plant
Stem-Atlantic
-0.1
+0.2
N.D.
-1.5
+0.2
plant
Stem-Atlantic
-0.0
-0.1
N.D.
-1.2
+0.1
plant
Stem-Atlantic
-0.2
-0.0
N.D.
-1.2
+0.3
plant
Stem-Norland
+0.1
+0.2
N.D.
-1.3
+0.0
plant
Stem-Norland
+0.1
+0.1
N.D.
-1.6
+0.5
plant
Stem-Norland
+0.0
+0.4
N.D.
-1.5
+0.3
plant
Atlantic
+0.1
+0.1
N.D.
-0.9
+0.1
plant
Stem-Upstate
+0.5
+0.2
N.D.
-1.0
-0.1
plant
Stem-Upstate
+0.1
+0.2
N.D.
-1.0
+0.4
plant
Stem-Upstate
+0.1
+0.8
N.D.
-1.4
+0.1
control
PDB
-0.2
-1.4
N.D.
+1.6
-0.2
control
PDB
-0.1
-1.1
N.D.
+1.5
-0.1
control
PDB
-0.0
-1.2
N.D.
+1.7
-0.2
control
LB
+0.1
+0.3
N.D.
+0.8
-0.0
stress
1.88mM_PTB
-0.0
+0.5
N.D.
+0.8
+0.0
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