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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS13095 and DZA65_RS13100 are separated by 344 nucleotides
DZA65_RS13100 and DZA65_RS13105 are separated by 572 nucleotides
DZA65_RS13105 and DZA65_RS13110 are separated by 173 nucleotides
DZA65_RS13110 and DZA65_RS13115 are separated by 262 nucleotides
DZA65_RS13095: DZA65_RS13095 - anhydro-N-acetylmuramic acid kinase, at 2,809,210 to 2,810,322
_RS13095
DZA65_RS13100: DZA65_RS13100 - glycine zipper 2TM domain-containing protein, at 2,810,667 to 2,811,134
_RS13100
DZA65_RS13105: DZA65_RS13105 - transcriptional regulator SlyA, at 2,811,707 to 2,812,144
_RS13105
DZA65_RS13110: DZA65_RS13110 - DUF1289 domain-containing protein, at 2,812,318 to 2,812,557
_RS13110
DZA65_RS13115: DZA65_RS13115 - lactoylglutathione lyase, at 2,812,820 to 2,813,227
_RS13115
Group
Condition
DZA65
_RS13095
DZA65
_RS13100
DZA65
_RS13105
DZA65
_RS13110
DZA65
_RS13115
control
PDB
-0.2
N.D.
-0.4
-1.5
+0.3
carbon source
M9+polygalacturonate
+0.2
N.D.
+0.0
-1.0
-0.2
plant
Atlantic
+0.1
N.D.
-0.4
-0.9
+0.3
plant
Stem-Upstate
+0.1
N.D.
+0.5
-1.0
-0.2
plant
Stem-Upstate
+0.3
N.D.
+1.6
-2.3
+0.3
plant
Atlantic
+0.4
N.D.
+0.1
-0.6
+0.3
plant
Atlantic
+0.0
N.D.
+0.6
-0.5
+0.3
plant
Stem-Atlantic
-0.2
N.D.
+0.9
-0.3
+0.1
control
PDB
-0.3
N.D.
+0.7
+0.8
-0.4
plant
Stem-Atlantic
+0.1
N.D.
+1.2
-0.0
-0.5
control
PDB
-0.3
N.D.
+0.5
+1.2
-0.5
carbon source
M9+sucrose
+0.3
N.D.
+0.5
+0.4
-0.3
plant
Stem-Norland
+0.2
N.D.
+1.2
-0.4
-0.0
plant
Stem-Norland
-0.1
N.D.
+1.5
-0.1
-0.3
control
PDB
-0.3
N.D.
+0.5
+1.5
-0.7
plant
Upstate
-0.2
N.D.
+0.7
+0.5
+0.1
plant
Stem-Norland
+0.2
N.D.
+0.7
+0.4
-0.2
plant
Upstate
-0.2
N.D.
+0.7
+0.3
+0.2
plant
Stem-Atlantic
+0.3
N.D.
+1.1
+0.0
-0.2
plant
Stem-Norland
+0.4
N.D.
+1.0
+0.2
-0.2
plant
Stem-Atlantic
+0.3
N.D.
+0.9
+0.2
-0.0
plant
Stem-Upstate
+0.3
N.D.
+1.0
-0.5
+0.6
plant
Stem-Norland
-0.1
N.D.
+0.7
+1.3
-0.6
plant
Stem-Norland
+0.2
N.D.
+0.5
+1.2
-0.4
plant
Upstate
-0.1
N.D.
+1.1
+0.4
+0.1
plant
Stem-Atlantic
+0.0
N.D.
+0.5
+1.4
-0.3
plant
Stem-Atlantic
+0.1
N.D.
+0.6
+0.8
+0.2
plant
Norland
+0.2
N.D.
+0.7
+0.6
+0.2
plant
Stem-Upstate
+1.2
N.D.
+0.1
+0.3
+0.2
plant
Stem-Upstate
+0.2
N.D.
+1.3
+1.5
-0.1
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