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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS12985 and DZA65_RS12990 overlap by 14 nucleotides
DZA65_RS12990 and DZA65_RS12995 are separated by 138 nucleotides
DZA65_RS12995 and DZA65_RS13000 are separated by 102 nucleotides
DZA65_RS13000 and DZA65_RS13005 are separated by 326 nucleotides
DZA65_RS12985: DZA65_RS12985 - hypothetical protein, at 2,784,474 to 2,784,680
_RS12985
DZA65_RS12990: DZA65_RS12990 - DUF2335 domain-containing protein, at 2,784,667 to 2,785,140
_RS12990
DZA65_RS12995: DZA65_RS12995 - exoribonuclease II, at 2,785,279 to 2,787,210
_RS12995
DZA65_RS13000: DZA65_RS13000 - aldo/keto reductase, at 2,787,313 to 2,788,230
_RS13000
DZA65_RS13005: DZA65_RS13005 - carbon starvation protein A, at 2,788,557 to 2,790,623
_RS13005
Group
Condition
DZA65
_RS12985
DZA65
_RS12990
DZA65
_RS12995
DZA65
_RS13000
DZA65
_RS13005
plant
Stem-Upstate
-0.7
-0.3
-0.7
+0.1
-0.5
plant
Stem-Atlantic
-0.4
-0.2
-0.7
-0.3
-0.4
plant
Stem-Norland
+0.1
-0.1
-1.2
-0.3
-0.4
control
LB
-0.8
+0.1
-0.9
-0.0
+0.1
control
LB
-0.6
+0.1
-0.7
-0.0
-0.1
plant
Stem-Upstate
+0.2
-0.1
-0.3
-0.6
-0.5
plant
Stem-Norland
+0.1
-0.1
-0.7
-0.1
-0.4
plant
Stem-Norland
-0.8
-0.0
-0.6
+0.5
-0.2
plant
Stem-Upstate
+0.2
+0.0
-0.8
-0.3
-0.2
carbon source
M9+sucrose
+0.2
+0.0
-1.1
-0.1
+0.0
plant
Stem-Norland
+0.4
-0.2
-1.1
+0.3
-0.2
plant
Stem-Atlantic
+0.1
+0.2
-1.0
+0.1
-0.2
plant
Stem-Atlantic
-0.3
-0.1
-0.7
+0.3
+0.1
plant
Stem-Norland
+0.6
-0.4
-0.8
-0.3
+0.1
plant
Stem-Norland
+1.1
-0.4
-1.3
+0.1
-0.2
plant
Upstate
+0.1
-0.1
-0.9
+0.3
-0.1
control
PDB
-0.3
+0.1
-0.7
+0.3
+0.0
plant
Atlantic
+0.4
-0.2
-0.6
-0.0
-0.2
plant
Atlantic
+0.7
+0.0
-0.9
+0.2
-0.3
carbon source
M9+sucrose
+0.6
+0.1
-0.8
-0.0
+0.0
plant
Atlantic
+0.6
+0.1
-0.4
-0.1
-0.2
plant
Norland
+0.4
+0.1
-0.8
+0.2
-0.0
plant
Norland
+0.8
+0.1
-0.7
-0.3
+0.1
carbon source
M9+sucrose
+0.7
+0.1
-0.9
+0.1
+0.0
plant
Norland
+0.7
+0.2
-0.7
+0.0
-0.1
plant
Atlantic
+0.7
+0.2
-0.6
+0.2
-0.2
plant
Upstate
+1.1
+0.0
-0.6
+0.1
-0.1
plant
Upstate
+0.8
+0.3
-0.5
+0.3
+0.0
plant
Norland
+1.0
+0.2
-0.3
+0.2
+0.1
plant
Stem-Upstate
+1.5
+0.1
-0.6
+0.2
+0.2
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