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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS12740 and DZA65_RS12745 are separated by 573 nucleotides
DZA65_RS12745 and DZA65_RS12750 are separated by 283 nucleotides
DZA65_RS12750 and DZA65_RS12755 are separated by 57 nucleotides
DZA65_RS12755 and DZA65_RS12760 are separated by 239 nucleotides
DZA65_RS12740: DZA65_RS12740 - transporter, at 2,725,597 to 2,726,274
_RS12740
DZA65_RS12745: DZA65_RS12745 - sodium-potassium/proton antiporter ChaA, at 2,726,848 to 2,727,948
_RS12745
DZA65_RS12750: DZA65_RS12750 - C4-dicarboxylic acid transporter DauA, at 2,728,232 to 2,729,947
_RS12750
DZA65_RS12755: DZA65_RS12755 - hypothetical protein, at 2,730,005 to 2,730,436
_RS12755
DZA65_RS12760: DZA65_RS12760 - two-component system response regulator RstA, at 2,730,676 to 2,731,419
_RS12760
Group
Condition
DZA65
_RS12740
DZA65
_RS12745
DZA65
_RS12750
DZA65
_RS12755
DZA65
_RS12760
plant
Stem-Upstate
-0.1
+0.3
-0.1
-1.8
-0.0
stress
3.75mM_PTB
+0.0
-1.1
-0.1
-0.3
-0.1
stress
3.75mM_PTB
-0.4
-0.5
-0.1
-0.5
-0.1
stress
3.75mM_PTB
-0.1
-1.0
-0.1
-0.1
-0.0
control
PDB
+0.1
-0.9
-0.0
-0.1
-0.4
control
PDB
-0.1
-0.1
+0.0
-0.3
-1.0
control
PDB
-0.1
-0.3
-0.0
+0.1
-0.8
plant
Stem-Upstate
-0.2
-0.0
-0.2
-0.9
+0.1
stress
3.75mM_PTB
-0.1
-0.7
-0.1
-0.4
+0.0
plant
Norland
-0.3
-0.4
+0.0
-0.2
-0.2
plant
Stem-Norland
-0.2
+0.1
-0.1
-0.7
-0.2
control
PDB
-0.2
-0.6
+0.0
+0.1
-0.3
control
LB
-0.2
-0.2
-0.0
-0.7
+0.1
plant
Upstate
-0.2
-0.5
-0.2
+0.1
-0.2
carbon source
M9+sucrose
+0.1
-0.5
-0.1
-0.3
-0.2
plant
Stem-Upstate
+0.2
-0.6
+0.0
-0.5
-0.0
plant
Stem-Upstate
-0.1
-0.4
-0.0
-0.6
+0.2
stress
1.88mM_PTB
+0.0
-0.4
-0.3
-0.3
+0.1
plant
Stem-Norland
+0.2
-0.1
-0.1
-0.7
-0.1
plant
Stem-Norland
+0.6
-1.2
+0.2
-0.4
+0.1
control
PDB
+0.1
+0.1
+0.0
+0.0
-1.0
plant
Upstate
-0.4
-0.3
+0.0
+0.2
-0.2
plant
Atlantic
-0.2
-0.5
-0.1
+0.3
-0.1
plant
Norland
-0.3
-0.5
-0.1
+0.3
+0.0
plant
Stem-Upstate
+0.1
+0.5
+0.1
-0.9
-0.3
plant
Stem-Atlantic
+0.4
-0.2
+0.1
-0.4
-0.2
control
LB
+0.1
-0.6
+0.1
+0.2
+0.1
plant
Stem-Atlantic
+0.3
-0.8
-0.0
+0.6
-0.1
plant
Stem-Norland
-0.2
+0.8
+0.1
-0.3
-0.5
plant
Stem-Norland
-0.2
+0.3
+0.1
+0.9
-0.4
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DZA65_RS12750
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