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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS12605 and DZA65_RS12610 are separated by 239 nucleotides
DZA65_RS12610 and DZA65_RS12615 are separated by 200 nucleotides
DZA65_RS12615 and DZA65_RS12620 are separated by 162 nucleotides
DZA65_RS12620 and DZA65_RS12625 are separated by 48 nucleotides
DZA65_RS12605: DZA65_RS12605 - phage tail protein I, at 2,699,127 to 2,699,738
_RS12605
DZA65_RS12610: DZA65_RS12610 - phage tail protein, at 2,699,978 to 2,701,138
_RS12610
DZA65_RS12615: DZA65_RS12615 - esterase-like activity of phytase family protein, at 2,701,339 to 2,702,694
_RS12615
DZA65_RS12620: DZA65_RS12620 - aromatic acid/H+ symport family MFS transporter, at 2,702,857 to 2,704,203
_RS12620
DZA65_RS12625: DZA65_RS12625 - DNA endonuclease SmrA, at 2,704,252 to 2,704,818
_RS12625
Group
Condition
DZA65
_RS12605
DZA65
_RS12610
DZA65
_RS12615
DZA65
_RS12620
DZA65
_RS12625
plant
Stem-Norland
-1.0
-0.4
-0.3
+0.3
+0.1
carbon source
M9+glycerol
-0.8
-0.2
+0.1
+0.1
+0.1
plant
Atlantic
-0.5
-0.3
-0.1
-0.0
+0.3
plant
Atlantic
-0.7
+0.0
-0.0
+0.2
+0.1
plant
Norland
-0.5
-0.3
+0.1
-0.1
+0.4
plant
Atlantic
-0.5
+0.0
-0.1
-0.1
+0.3
stress
1.88mM_PTB
+0.1
-0.3
-0.2
+0.2
-0.1
plant
Stem-Norland
-0.1
-0.3
-0.1
+0.2
+0.1
plant
Stem-Norland
-0.1
-0.3
+0.0
-0.1
+0.3
plant
Stem-Atlantic
-0.3
-0.0
+0.3
+0.1
-0.3
plant
Norland
-0.3
-0.1
-0.1
+0.2
+0.2
plant
Upstate
-0.3
+0.1
+0.1
-0.1
+0.2
plant
Upstate
-0.1
-0.3
+0.1
-0.1
+0.4
plant
Norland
-0.4
+0.1
+0.1
+0.1
+0.3
control
PDB
-0.2
+0.1
+0.1
-0.3
+0.3
carbon source
M9+starch
+0.2
-0.2
+0.2
+0.1
-0.2
plant
Stem-Norland
+0.3
-0.2
+0.0
+0.2
-0.2
plant
Upstate
-0.2
-0.2
+0.2
+0.1
+0.2
control
PDB
-0.5
-0.1
+0.2
+0.2
+0.3
plant
Stem-Norland
-0.0
+0.0
+0.1
+0.4
-0.3
plant
Atlantic
-0.0
-0.2
-0.0
+0.2
+0.3
plant
Upstate
-0.3
-0.2
+0.1
+0.1
+0.5
plant
Stem-Atlantic
+0.2
-0.2
+0.1
+0.4
+0.1
plant
Stem-Norland
-0.4
+0.0
+0.2
+0.2
+0.6
plant
Norland
+0.4
-0.2
-0.0
-0.0
+0.5
plant
Stem-Atlantic
+0.5
-0.2
+0.1
+0.4
-0.1
plant
Stem-Upstate
+0.4
+0.1
+0.1
+0.1
-0.1
plant
Stem-Upstate
+0.3
+0.3
-0.2
+0.4
-0.1
plant
Stem-Upstate
+0.0
+0.2
+0.2
+0.2
+0.2
plant
Stem-Atlantic
+0.4
+0.0
+0.1
+0.3
+0.1
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