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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS12585 and DZA65_RS22915 are separated by 331 nucleotides
DZA65_RS22915 and DZA65_RS12590 are separated by 156 nucleotides
DZA65_RS12590 and DZA65_RS12595 overlap by 4 nucleotides
DZA65_RS12595 and DZA65_RS12600 are separated by 4 nucleotides
DZA65_RS12585: DZA65_RS12585 - phage tail protein, at 2,696,128 to 2,696,589
_RS12585
DZA65_RS22915: DZA65_RS22915 - hypothetical protein, at 2,696,921 to 2,697,064
_RS22915
DZA65_RS12590: DZA65_RS12590 - phage baseplate assembly protein V, at 2,697,221 to 2,697,874
_RS12590
DZA65_RS12595: DZA65_RS12595 - baseplate assembly protein, at 2,697,871 to 2,698,221
_RS12595
DZA65_RS12600: DZA65_RS12600 - baseplate assembly protein, at 2,698,226 to 2,699,134
_RS12600
Group
Condition
DZA65
_RS12585
DZA65
_RS22915
DZA65
_RS12590
DZA65
_RS12595
DZA65
_RS12600
plant
Stem-Norland
-0.3
N.D.
-1.4
-0.0
+0.2
stress
3.75mM_PTB
-0.8
N.D.
-0.3
-0.2
-0.1
plant
Stem-Upstate
-0.7
N.D.
+0.3
-0.1
-0.4
plant
Stem-Upstate
-0.6
N.D.
-0.7
+0.2
+0.3
control
LB
-0.7
N.D.
-0.1
-0.0
+0.1
plant
Stem-Upstate
-0.3
N.D.
-0.0
-0.5
+0.1
control
LB
-0.1
N.D.
-0.4
+0.1
-0.1
stress
3.75mM_PTB
-0.6
N.D.
-0.1
+0.1
+0.1
plant
Atlantic
-0.3
N.D.
-0.2
-0.1
+0.2
plant
Stem-Norland
+0.4
N.D.
-0.3
-0.3
-0.0
plant
Atlantic
-0.3
N.D.
+0.2
-0.3
+0.2
plant
Norland
+0.3
N.D.
+0.1
-0.6
-0.0
carbon source
M9+glycerol
+0.4
N.D.
-0.2
-0.1
-0.2
plant
Stem-Atlantic
-0.1
N.D.
+0.1
-0.4
+0.3
plant
Stem-Norland
-0.1
N.D.
+0.2
-0.5
+0.3
plant
Upstate
-0.4
N.D.
+0.3
-0.0
+0.1
control
PDB
+0.1
N.D.
+0.2
-0.3
+0.2
control
PDB
-0.1
N.D.
+0.5
-0.2
+0.0
plant
Stem-Norland
+0.3
N.D.
+0.4
-0.6
+0.1
control
LB
-0.3
N.D.
+0.2
+0.1
+0.2
control
PDB
+0.1
N.D.
+0.2
-0.2
+0.1
plant
Stem-Upstate
+0.0
N.D.
-0.3
+0.5
+0.1
plant
Stem-Upstate
+0.6
N.D.
+0.7
-0.8
-0.1
plant
Norland
-0.4
N.D.
+0.1
+0.7
+0.0
stress
3.75mM_PTB
-0.3
N.D.
+0.3
+0.5
+0.0
plant
Upstate
+0.3
N.D.
+0.2
-0.1
+0.2
plant
Stem-Atlantic
+0.4
N.D.
+0.4
-0.2
+0.1
plant
Stem-Upstate
-0.1
N.D.
-0.1
+0.6
+0.5
plant
Atlantic
+0.1
N.D.
+0.3
+0.1
+0.3
plant
Stem-Norland
+0.4
N.D.
+0.3
-0.1
+0.3
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