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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS11775 and DZA65_RS11780 are separated by 165 nucleotides
DZA65_RS11780 and DZA65_RS11785 are separated by 73 nucleotides
DZA65_RS11785 and DZA65_RS11790 are separated by 18 nucleotides
DZA65_RS11790 and DZA65_RS11795 are separated by 3 nucleotides
DZA65_RS11775: DZA65_RS11775 - ammonia-dependent NAD(+) synthetase, at 2,512,655 to 2,513,479
_RS11775
DZA65_RS11780: DZA65_RS11780 - drug/metabolite DMT transporter permease, at 2,513,645 to 2,514,547
_RS11780
DZA65_RS11785: DZA65_RS11785 - nitrous oxide-stimulated promoter family protein, at 2,514,621 to 2,515,028
_RS11785
DZA65_RS11790: DZA65_RS11790 - integration host factor subunit alpha, at 2,515,047 to 2,515,346
_RS11790
DZA65_RS11795: DZA65_RS11795 - phenylalanine--tRNA ligase subunit beta, at 2,515,350 to 2,517,737
_RS11795
Group
Condition
DZA65
_RS11775
DZA65
_RS11780
DZA65
_RS11785
DZA65
_RS11790
DZA65
_RS11795
plant
Stem-Atlantic
N.D.
-0.0
-0.2
N.D.
N.D.
plant
Upstate
N.D.
-0.1
-0.2
N.D.
N.D.
plant
Stem-Atlantic
N.D.
+0.1
-0.4
N.D.
N.D.
control
LB
N.D.
-0.2
-0.1
N.D.
N.D.
plant
Stem-Norland
N.D.
-0.2
-0.1
N.D.
N.D.
plant
Stem-Norland
N.D.
+0.1
-0.3
N.D.
N.D.
plant
Stem-Norland
N.D.
+0.1
-0.3
N.D.
N.D.
stress
3.75mM_PTB
N.D.
-0.3
+0.2
N.D.
N.D.
stress
3.75mM_PTB
N.D.
-0.2
+0.1
N.D.
N.D.
plant
Stem-Norland
N.D.
+0.2
-0.2
N.D.
N.D.
plant
Atlantic
N.D.
+0.1
-0.2
N.D.
N.D.
plant
Stem-Atlantic
N.D.
+0.1
-0.2
N.D.
N.D.
plant
Stem-Upstate
N.D.
+0.2
-0.2
N.D.
N.D.
control
PDB
N.D.
+0.1
-0.1
N.D.
N.D.
stress
1.88mM_PTB
N.D.
-0.1
+0.1
N.D.
N.D.
carbon source
M9+starch
N.D.
+0.2
-0.1
N.D.
N.D.
stress
1.88mM_PTB
N.D.
-0.1
+0.2
N.D.
N.D.
plant
Atlantic
N.D.
+0.2
-0.1
N.D.
N.D.
control
PDB
N.D.
-0.1
+0.3
N.D.
N.D.
plant
Norland
N.D.
-0.1
+0.3
N.D.
N.D.
control
LB
N.D.
-0.2
+0.4
N.D.
N.D.
plant
Upstate
N.D.
-0.0
+0.2
N.D.
N.D.
stress
1.88mM_PTB
N.D.
-0.1
+0.4
N.D.
N.D.
carbon source
M9+glycerol
N.D.
-0.1
+0.3
N.D.
N.D.
control
LB
N.D.
-0.1
+0.3
N.D.
N.D.
plant
Stem-Atlantic
N.D.
+0.2
+0.1
N.D.
N.D.
plant
Stem-Upstate
N.D.
+0.3
+0.3
N.D.
N.D.
plant
Stem-Upstate
N.D.
+0.3
+0.3
N.D.
N.D.
plant
Stem-Upstate
N.D.
+0.3
+0.3
N.D.
N.D.
plant
Stem-Upstate
N.D.
+0.3
+0.4
N.D.
N.D.
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DZA65_RS11785
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