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Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS11395 and DZA65_RS11400 overlap by 4 nucleotides
DZA65_RS11400 and DZA65_RS11405 are separated by 47 nucleotides
DZA65_RS11405 and DZA65_RS11410 are separated by 209 nucleotides
DZA65_RS11410 and DZA65_RS11415 are separated by 3 nucleotides
DZA65_RS11395: DZA65_RS11395 - peptide chain release factor N(5)-glutamine methyltransferase, at 2,424,588 to 2,425,439
_RS11395
DZA65_RS11400: DZA65_RS11400 - peptide chain release factor 1, at 2,425,436 to 2,426,521
_RS11400
DZA65_RS11405: DZA65_RS11405 - glutamyl-tRNA reductase, at 2,426,569 to 2,427,825
_RS11405
DZA65_RS11410: DZA65_RS11410 - lipoprotein localization protein LolB, at 2,428,035 to 2,428,655
_RS11410
DZA65_RS11415: DZA65_RS11415 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase, at 2,428,659 to 2,429,531
_RS11415
Group
Condition
DZA65
_RS11395
DZA65
_RS11400
DZA65
_RS11405
DZA65
_RS11410
DZA65
_RS11415
plant
Stem-Norland
-2.6
N.D.
N.D.
N.D.
N.D.
plant
Upstate
-2.2
N.D.
N.D.
N.D.
N.D.
plant
Upstate
-1.9
N.D.
N.D.
N.D.
N.D.
control
PDB
-1.9
N.D.
N.D.
N.D.
N.D.
plant
Atlantic
-1.9
N.D.
N.D.
N.D.
N.D.
plant
Stem-Norland
-1.7
N.D.
N.D.
N.D.
N.D.
plant
Upstate
-1.6
N.D.
N.D.
N.D.
N.D.
control
PDB
-1.6
N.D.
N.D.
N.D.
N.D.
plant
Stem-Upstate
-1.5
N.D.
N.D.
N.D.
N.D.
plant
Stem-Norland
-1.5
N.D.
N.D.
N.D.
N.D.
plant
Norland
-1.4
N.D.
N.D.
N.D.
N.D.
plant
Norland
-1.4
N.D.
N.D.
N.D.
N.D.
plant
Norland
-1.4
N.D.
N.D.
N.D.
N.D.
plant
Stem-Upstate
-1.1
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glycerol
-1.1
N.D.
N.D.
N.D.
N.D.
plant
Stem-Upstate
-1.1
N.D.
N.D.
N.D.
N.D.
plant
Norland
-1.1
N.D.
N.D.
N.D.
N.D.
plant
Atlantic
-1.1
N.D.
N.D.
N.D.
N.D.
control
PDB
-1.0
N.D.
N.D.
N.D.
N.D.
plant
Norland
-1.0
N.D.
N.D.
N.D.
N.D.
plant
Norland
-1.0
N.D.
N.D.
N.D.
N.D.
plant
Upstate
-0.9
N.D.
N.D.
N.D.
N.D.
plant
Stem-Norland
-0.8
N.D.
N.D.
N.D.
N.D.
plant
Stem-Atlantic
-0.8
N.D.
N.D.
N.D.
N.D.
plant
Atlantic
-0.8
N.D.
N.D.
N.D.
N.D.
plant
Upstate
-0.8
N.D.
N.D.
N.D.
N.D.
plant
Stem-Atlantic
-0.7
N.D.
N.D.
N.D.
N.D.
plant
Stem-Atlantic
-0.7
N.D.
N.D.
N.D.
N.D.
control
LB
+0.7
N.D.
N.D.
N.D.
N.D.
plant
Stem-Norland
+1.7
N.D.
N.D.
N.D.
N.D.
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