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Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS10575 and DZA65_RS10580 are separated by 364 nucleotides
DZA65_RS10580 and DZA65_RS10585 are separated by 153 nucleotides
DZA65_RS10585 and DZA65_RS10590 are separated by 208 nucleotides
DZA65_RS10590 and DZA65_RS10595 are separated by 296 nucleotides
DZA65_RS10575: DZA65_RS10575 - MurR/RpiR family transcriptional regulator, at 2,242,682 to 2,243,551
_RS10575
DZA65_RS10580: DZA65_RS10580 - glucose-6-phosphate dehydrogenase, at 2,243,916 to 2,245,391
_RS10580
DZA65_RS10585: DZA65_RS10585 - bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase, at 2,245,545 to 2,246,186
_RS10585
DZA65_RS10590: DZA65_RS10590 - formate-dependent phosphoribosylglycinamide formyltransferase, at 2,246,395 to 2,247,573
_RS10590
DZA65_RS10595: DZA65_RS10595 - prolyl oligopeptidase family serine peptidase, at 2,247,870 to 2,249,921
_RS10595
Group
Condition
DZA65
_RS10575
DZA65
_RS10580
DZA65
_RS10585
DZA65
_RS10590
DZA65
_RS10595
plant
Stem-Atlantic
-0.1
-1.7
-3.5
-0.0
+0.1
carbon source
M9+polygalacturonate
+0.0
-1.4
-3.6
+0.2
-0.0
plant
Stem-Atlantic
+0.0
-1.5
-3.3
+0.0
-0.0
plant
Stem-Atlantic
-0.2
-1.4
-3.0
-0.3
+0.1
plant
Stem-Atlantic
+0.1
-1.3
-3.7
+0.0
+0.1
plant
Stem-Atlantic
-0.4
-1.3
-3.0
+0.1
-0.0
plant
Stem-Norland
+0.0
-1.0
-3.2
-0.4
+0.1
carbon source
M9+polygalacturonate
+0.3
-1.7
-3.2
+0.1
-0.0
carbon source
M9+polygalacturonate
+0.1
-1.5
-3.1
+0.0
-0.0
plant
Stem-Norland
-0.3
-1.3
-2.9
+0.2
+0.0
plant
Stem-Norland
+0.1
-1.1
-3.4
-0.0
+0.1
plant
Stem-Atlantic
-0.0
-1.2
-3.1
+0.1
+0.1
plant
Stem-Atlantic
+0.1
-1.2
-3.2
+0.2
+0.0
plant
Stem-Norland
+0.1
-1.8
-2.3
-0.0
-0.0
plant
Stem-Norland
-0.0
-1.1
-2.6
-0.2
-0.1
plant
Upstate
+0.2
-0.6
-3.4
-0.2
+0.0
plant
Upstate
+0.2
-0.6
-3.6
+0.2
-0.1
plant
Stem-Norland
-0.4
-0.9
-2.4
-0.1
+0.1
plant
Stem-Norland
-0.3
-1.4
-1.9
-0.2
+0.2
plant
Upstate
+0.1
-0.8
-2.9
+0.1
-0.1
plant
Norland
-0.1
-0.8
-2.6
-0.1
+0.0
plant
Stem-Upstate
+0.2
-1.6
-2.1
+0.1
-0.0
plant
Stem-Norland
+0.1
-1.5
-2.4
+0.3
+0.0
plant
Norland
-0.1
-0.6
-2.7
-0.2
+0.1
plant
Upstate
-0.1
-0.9
-2.7
+0.2
+0.1
plant
Stem-Upstate
+0.1
-1.1
-2.1
-0.4
+0.2
plant
Upstate
+0.2
-0.5
-2.8
-0.1
+0.1
plant
Stem-Upstate
-0.2
-1.1
-2.1
+0.0
+0.2
plant
Upstate
+0.3
-0.4
-2.8
-0.1
+0.1
plant
Stem-Upstate
+0.5
-1.1
-2.5
+0.3
-0.0
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