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Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS10510 and DZA65_RS10515 are separated by 40 nucleotides
DZA65_RS10515 and DZA65_RS10520 are separated by 293 nucleotides
DZA65_RS10520 and DZA65_RS10525 are separated by 206 nucleotides
DZA65_RS10525 and DZA65_RS10530 are separated by 7 nucleotides
DZA65_RS10510: DZA65_RS10510 - YebC/PmpR family DNA-binding transcriptional regulator, at 2,229,591 to 2,230,334
_RS10510
DZA65_RS10515: DZA65_RS10515 - crossover junction endodeoxyribonuclease RuvC, at 2,230,375 to 2,230,896
_RS10515
DZA65_RS10520: DZA65_RS10520 - HoxN/HupN/NixA family nickel/cobalt transporter, at 2,231,190 to 2,232,221
_RS10520
DZA65_RS10525: DZA65_RS10525 - Holliday junction branch migration protein RuvA, at 2,232,428 to 2,233,042
_RS10525
DZA65_RS10530: DZA65_RS10530 - Holliday junction branch migration DNA helicase RuvB, at 2,233,050 to 2,234,054
_RS10530
Group
Condition
DZA65
_RS10510
DZA65
_RS10515
DZA65
_RS10520
DZA65
_RS10525
DZA65
_RS10530
plant
Atlantic
-0.6
N.D.
-0.3
N.D.
N.D.
plant
Stem-Norland
-0.7
N.D.
-0.0
N.D.
N.D.
plant
Atlantic
-0.7
N.D.
-0.1
N.D.
N.D.
plant
Upstate
-0.6
N.D.
-0.1
N.D.
N.D.
plant
Stem-Atlantic
-0.4
N.D.
-0.2
N.D.
N.D.
plant
Upstate
-0.5
N.D.
+0.0
N.D.
N.D.
plant
Stem-Atlantic
-0.3
N.D.
-0.2
N.D.
N.D.
plant
Atlantic
-0.2
N.D.
-0.2
N.D.
N.D.
plant
Stem-Norland
-0.3
N.D.
-0.0
N.D.
N.D.
plant
Atlantic
-0.4
N.D.
+0.0
N.D.
N.D.
plant
Upstate
-0.3
N.D.
+0.0
N.D.
N.D.
stress
1.88mM_PTB
-0.3
N.D.
+0.1
N.D.
N.D.
plant
Stem-Atlantic
-0.3
N.D.
+0.2
N.D.
N.D.
carbon source
M9+glycerol
+0.3
N.D.
-0.2
N.D.
N.D.
control
PDB
+0.3
N.D.
-0.2
N.D.
N.D.
control
LB
+0.3
N.D.
-0.1
N.D.
N.D.
control
LB
+0.4
N.D.
-0.0
N.D.
N.D.
plant
Stem-Norland
+0.0
N.D.
+0.3
N.D.
N.D.
stress
3.75mM_PTB
+0.3
N.D.
+0.1
N.D.
N.D.
control
LB
+0.3
N.D.
+0.1
N.D.
N.D.
carbon source
M9+sucrose
+0.3
N.D.
+0.1
N.D.
N.D.
stress
1.88mM_PTB
+0.3
N.D.
+0.2
N.D.
N.D.
plant
Stem-Atlantic
+0.3
N.D.
+0.1
N.D.
N.D.
plant
Stem-Upstate
+0.3
N.D.
+0.2
N.D.
N.D.
carbon source
M9+glycerol
+0.5
N.D.
-0.0
N.D.
N.D.
control
LB
+0.6
N.D.
-0.0
N.D.
N.D.
plant
Stem-Upstate
+0.7
N.D.
-0.0
N.D.
N.D.
plant
Stem-Norland
+0.4
N.D.
+0.4
N.D.
N.D.
plant
Stem-Upstate
+0.8
N.D.
+0.1
N.D.
N.D.
plant
Stem-Upstate
+1.7
N.D.
-0.1
N.D.
N.D.
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