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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS10155 and DZA65_RS10160 overlap by 39 nucleotides
DZA65_RS10160 and DZA65_RS10165 are separated by 203 nucleotides
DZA65_RS10165 and DZA65_RS10170 are separated by 59 nucleotides
DZA65_RS10170 and DZA65_RS10175 are separated by 170 nucleotides
DZA65_RS10155: DZA65_RS10155 - exodeoxyribonuclease I, at 2,148,316 to 2,149,746
_RS10155
DZA65_RS10160: DZA65_RS10160 - hypothetical protein, at 2,149,708 to 2,149,947
_RS10160
DZA65_RS10165: DZA65_RS10165 - DUF496 family protein, at 2,150,151 to 2,150,489
_RS10165
DZA65_RS10170: DZA65_RS10170 - hypothetical protein, at 2,150,549 to 2,150,728
_RS10170
DZA65_RS10175: DZA65_RS10175 - ComEC family protein, at 2,150,899 to 2,153,151
_RS10175
Group
Condition
DZA65
_RS10155
DZA65
_RS10160
DZA65
_RS10165
DZA65
_RS10170
DZA65
_RS10175
carbon source
M9+sucrose
-0.2
N.D.
-1.4
N.D.
-0.1
carbon source
M9+sucrose
-0.1
N.D.
-1.2
N.D.
-0.1
control
PDB
-0.1
N.D.
-1.2
N.D.
-0.1
control
PDB
-0.0
N.D.
-1.2
N.D.
+0.0
carbon source
M9+sucrose
-0.3
N.D.
-0.8
N.D.
-0.1
control
PDB
-0.1
N.D.
-1.0
N.D.
-0.0
control
PDB
+0.1
N.D.
-1.0
N.D.
-0.2
control
PDB
-0.1
N.D.
-1.0
N.D.
-0.0
plant
Stem-Atlantic
-0.3
N.D.
-0.4
N.D.
-0.1
control
PDB
-0.1
N.D.
-0.7
N.D.
-0.0
plant
Stem-Norland
-0.4
N.D.
-0.5
N.D.
+0.0
plant
Stem-Norland
-0.1
N.D.
-0.3
N.D.
-0.3
carbon source
M9+starch
-0.4
N.D.
+0.0
N.D.
-0.3
plant
Stem-Norland
-0.4
N.D.
-0.0
N.D.
-0.2
control
LB
-0.3
N.D.
-0.3
N.D.
-0.0
plant
Stem-Upstate
-0.0
N.D.
-0.5
N.D.
+0.0
control
LB
-0.3
N.D.
-0.4
N.D.
+0.2
control
LB
-0.3
N.D.
-0.2
N.D.
-0.0
carbon source
M9+starch
-0.1
N.D.
-0.4
N.D.
+0.0
plant
Stem-Upstate
-0.3
N.D.
-0.2
N.D.
+0.1
plant
Stem-Upstate
-0.5
N.D.
+0.2
N.D.
+0.0
plant
Stem-Norland
-0.3
N.D.
+0.4
N.D.
-0.2
plant
Upstate
-0.1
N.D.
+0.2
N.D.
-0.2
plant
Stem-Atlantic
-0.3
N.D.
+0.2
N.D.
+0.0
plant
Atlantic
-0.2
N.D.
+0.3
N.D.
-0.1
plant
Stem-Atlantic
-0.4
N.D.
+0.1
N.D.
+0.2
plant
Upstate
-0.2
N.D.
+0.3
N.D.
-0.1
plant
Norland
-0.2
N.D.
+0.5
N.D.
-0.1
stress
3.75mM_PTB
-0.1
N.D.
+0.4
N.D.
+0.1
plant
Stem-Atlantic
-0.2
N.D.
+0.5
N.D.
+0.1
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