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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS09920 and DZA65_RS09925 are separated by 193 nucleotides
DZA65_RS09925 and DZA65_RS09930 are separated by 7 nucleotides
DZA65_RS09930 and DZA65_RS09935 are separated by 107 nucleotides
DZA65_RS09935 and DZA65_RS09940 are separated by 292 nucleotides
DZA65_RS09920: DZA65_RS09920 - DNA translocase FtsK, at 2,093,813 to 2,097,343
_RS09920
DZA65_RS09925: DZA65_RS09925 - outer membrane lipoprotein chaperone LolA, at 2,097,537 to 2,098,151
_RS09925
DZA65_RS09930: DZA65_RS09930 - replication-associated recombination protein A, at 2,098,159 to 2,099,502
_RS09930
DZA65_RS09935: DZA65_RS09935 - serine--tRNA ligase, at 2,099,610 to 2,100,905
_RS09935
DZA65_RS09940: DZA65_RS09940 - Tat proofreading chaperone DmsD, at 2,101,198 to 2,101,812
_RS09940
Group
Condition
DZA65
_RS09920
DZA65
_RS09925
DZA65
_RS09930
DZA65
_RS09935
DZA65
_RS09940
plant
Stem-Norland
N.D.
N.D.
-0.3
N.D.
-0.4
plant
Stem-Upstate
N.D.
N.D.
-0.2
N.D.
-0.4
plant
Upstate
N.D.
N.D.
-0.2
N.D.
-0.4
plant
Stem-Atlantic
N.D.
N.D.
-0.2
N.D.
-0.3
plant
Norland
N.D.
N.D.
-0.1
N.D.
-0.3
plant
Stem-Atlantic
N.D.
N.D.
-0.2
N.D.
-0.3
plant
Stem-Upstate
N.D.
N.D.
+0.1
N.D.
-0.5
plant
Stem-Upstate
N.D.
N.D.
-0.2
N.D.
-0.1
control
LB
N.D.
N.D.
-0.1
N.D.
-0.2
plant
Upstate
N.D.
N.D.
-0.0
N.D.
-0.3
control
PDB
N.D.
N.D.
-0.0
N.D.
-0.3
control
LB
N.D.
N.D.
-0.1
N.D.
-0.2
carbon source
M9+sucrose
N.D.
N.D.
-0.3
N.D.
-0.1
control
LB
N.D.
N.D.
-0.3
N.D.
+0.1
stress
1.88mM_PTB
N.D.
N.D.
-0.3
N.D.
+0.2
control
LB
N.D.
N.D.
-0.2
N.D.
+0.1
plant
Stem-Upstate
N.D.
N.D.
-0.2
N.D.
+0.2
stress
3.75mM_PTB
N.D.
N.D.
-0.2
N.D.
+0.2
stress
3.75mM_PTB
N.D.
N.D.
-0.2
N.D.
+0.3
carbon source
M9+sucrose
N.D.
N.D.
-0.2
N.D.
+0.3
stress
1.88mM_PTB
N.D.
N.D.
-0.1
N.D.
+0.2
stress
1.88mM_PTB
N.D.
N.D.
-0.2
N.D.
+0.3
plant
Stem-Upstate
N.D.
N.D.
-0.2
N.D.
+0.3
carbon source
M9+sucrose
N.D.
N.D.
-0.2
N.D.
+0.4
carbon source
M9+glycerol
N.D.
N.D.
-0.1
N.D.
+0.4
plant
Stem-Norland
N.D.
N.D.
-0.1
N.D.
+0.4
plant
Norland
N.D.
N.D.
+0.0
N.D.
+0.3
plant
Upstate
N.D.
N.D.
+0.1
N.D.
+0.2
plant
Stem-Upstate
N.D.
N.D.
+0.1
N.D.
+0.3
plant
Stem-Norland
N.D.
N.D.
+0.0
N.D.
+0.7
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