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Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS09715 and DZA65_RS09720 are separated by 53 nucleotides
DZA65_RS09720 and DZA65_RS09725 are separated by 290 nucleotides
DZA65_RS09725 and DZA65_RS09730 are separated by 132 nucleotides
DZA65_RS09730 and DZA65_RS09735 overlap by 8 nucleotides
DZA65_RS09715: DZA65_RS09715 - PQQ-dependent sugar dehydrogenase, at 2,049,670 to 2,050,794
_RS09715
DZA65_RS09720: DZA65_RS09720 - glutathione S-transferase, at 2,050,848 to 2,051,465
_RS09720
DZA65_RS09725: DZA65_RS09725 - methionine ABC transporter ATPase, at 2,051,756 to 2,052,601
_RS09725
DZA65_RS09730: DZA65_RS09730 - methionine ABC transporter ATP-binding protein, at 2,052,734 to 2,053,750
_RS09730
DZA65_RS09735: DZA65_RS09735 - ABC transporter permease, at 2,053,743 to 2,054,405
_RS09735
Group
Condition
DZA65
_RS09715
DZA65
_RS09720
DZA65
_RS09725
DZA65
_RS09730
DZA65
_RS09735
stress
1.88mM_PTB
-0.3
+0.0
-0.3
-0.0
-0.1
stress
1.88mM_PTB
+0.0
-0.1
-0.0
-0.2
-0.3
plant
Upstate
-0.1
-0.2
-0.2
-0.2
-0.0
plant
Atlantic
+0.0
-0.2
-0.2
-0.2
-0.1
plant
Atlantic
-0.1
-0.1
-0.2
-0.2
+0.0
carbon source
M9+starch
+0.1
-0.1
-0.3
-0.0
-0.2
plant
Atlantic
-0.3
-0.2
+0.1
-0.2
+0.1
plant
Stem-Atlantic
-0.0
-0.0
+0.1
-0.1
-0.4
carbon source
M9+polygalacturonate
-0.0
-0.2
-0.4
+0.1
+0.0
plant
Stem-Norland
+0.2
-0.1
+0.1
-0.6
+0.0
carbon source
M9+starch
+0.1
-0.2
-0.2
-0.2
+0.0
plant
Stem-Norland
-0.3
-0.0
+0.5
+0.1
-0.7
carbon source
M9+sucrose
+0.1
-0.0
-0.5
+0.2
-0.1
plant
Stem-Upstate
-0.3
-0.3
+0.3
+0.1
-0.1
control
LB
+0.1
-0.3
+0.1
-0.2
+0.1
plant
Stem-Upstate
+0.2
-0.1
+0.4
-0.4
-0.4
plant
Norland
+0.1
-0.2
-0.1
-0.2
+0.2
plant
Stem-Norland
-0.6
-0.1
+0.2
+0.2
+0.1
control
LB
+0.1
-0.2
-0.0
+0.2
-0.3
carbon source
M9+glycerol
+0.1
-0.2
-0.2
+0.2
-0.1
plant
Stem-Atlantic
-0.1
-0.0
+0.2
+0.1
-0.3
plant
Norland
-0.1
-0.4
+0.2
+0.1
+0.0
plant
Stem-Atlantic
+0.2
-0.2
+0.2
+0.0
-0.1
stress
3.75mM_PTB
+0.2
+0.1
+0.1
-0.2
-0.1
plant
Stem-Upstate
+0.5
-0.4
-0.3
+0.0
+0.4
plant
Stem-Norland
-0.4
+0.2
+0.5
+0.3
-0.2
plant
Stem-Upstate
+0.1
-0.3
+0.3
+0.1
+0.3
control
LB
+0.0
+0.2
-0.0
+0.3
+0.1
plant
Stem-Upstate
+0.0
+0.1
+0.1
+0.3
+0.0
plant
Stem-Upstate
+0.1
+0.1
+0.3
-0.1
+0.7
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