Fitness for 5 genes in Dickeya dianthicola ME23

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Top 30 experiments (either direction), sorted by average fitness

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500 ntDZA65_RS09710 and DZA65_RS09715 are separated by 255 nucleotidesDZA65_RS09715 and DZA65_RS09720 are separated by 53 nucleotidesDZA65_RS09720 and DZA65_RS09725 are separated by 290 nucleotidesDZA65_RS09725 and DZA65_RS09730 are separated by 132 nucleotides DZA65_RS09710: DZA65_RS09710 - 30S ribosomal protein S12 methylthiotransferase RimO, at 2,048,011 to 2,049,414 _RS09710 DZA65_RS09715: DZA65_RS09715 - PQQ-dependent sugar dehydrogenase, at 2,049,670 to 2,050,794 _RS09715 DZA65_RS09720: DZA65_RS09720 - glutathione S-transferase, at 2,050,848 to 2,051,465 _RS09720 DZA65_RS09725: DZA65_RS09725 - methionine ABC transporter ATPase, at 2,051,756 to 2,052,601 _RS09725 DZA65_RS09730: DZA65_RS09730 - methionine ABC transporter ATP-binding protein, at 2,052,734 to 2,053,750 _RS09730
Group Condition DZA65_RS09710 DZA65_RS09715 DZA65_RS09720 DZA65_RS09725 DZA65_RS09730
stress 1.88mM_PTB -0.1 -0.3 +0.0 -0.3 -0.0
plant Stem-Norland -0.2 -0.2 -0.1 -0.1 -0.1
plant Stem-Norland -0.4 -0.6 -0.1 +0.2 +0.2
plant Atlantic +0.0 -0.1 -0.1 -0.2 -0.2
plant Upstate +0.0 -0.1 -0.2 -0.2 -0.2
plant Atlantic -0.0 -0.3 -0.2 +0.1 -0.2
plant Stem-Norland -0.1 +0.2 -0.1 +0.1 -0.6
carbon source M9+starch -0.2 +0.1 -0.2 -0.2 -0.2
carbon source M9+sucrose -0.4 +0.1 -0.0 -0.5 +0.2
carbon source M9+polygalacturonate -0.1 -0.0 -0.2 -0.4 +0.1
carbon source M9+glycerol -0.2 +0.1 -0.2 -0.2 +0.2
plant Norland +0.1 +0.1 -0.2 -0.1 -0.2
plant Upstate +0.1 -0.3 +0.0 -0.1 +0.0
plant Upstate +0.1 +0.1 +0.1 -0.4 -0.1
plant Stem-Upstate -0.0 +0.5 -0.4 -0.3 +0.0
stress 3.75mM_PTB -0.4 +0.2 +0.1 +0.1 -0.2
plant Stem-Upstate -0.5 +0.1 +0.1 +0.3 -0.1
plant Stem-Upstate +0.1 -0.3 -0.3 +0.3 +0.1
control LB -0.2 +0.1 -0.2 -0.0 +0.2
plant Stem-Upstate -0.2 +0.1 -0.3 +0.3 +0.1
plant Norland +0.1 -0.1 -0.4 +0.2 +0.1
plant Stem-Norland -0.3 -0.3 -0.0 +0.5 +0.1
plant Stem-Atlantic -0.1 +0.2 -0.2 +0.2 +0.0
plant Atlantic +0.3 +0.1 -0.1 -0.2 -0.0
control LB -0.1 -0.1 +0.2 +0.1 +0.1
control LB -0.1 -0.0 -0.1 +0.1 +0.3
plant Stem-Upstate +0.1 +0.2 -0.1 +0.4 -0.4
plant Stem-Norland -0.1 -0.4 +0.2 +0.5 +0.3
control LB -0.1 +0.0 +0.2 -0.0 +0.3
plant Stem-Upstate -0.2 +0.0 +0.1 +0.1 +0.3
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DZA65_RS09710
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DZA65_RS09715
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DZA65_RS09725
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