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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS09445 and DZA65_RS09450 are separated by 181 nucleotides
DZA65_RS09450 and DZA65_RS09455 are separated by 78 nucleotides
DZA65_RS09455 and DZA65_RS09460 are separated by 13 nucleotides
DZA65_RS09460 and DZA65_RS09465 are separated by 161 nucleotides
DZA65_RS09445: DZA65_RS09445 - response regulator, at 1,986,784 to 1,986,957
_RS09445
DZA65_RS09450: DZA65_RS09450 - tRNA-Pro, at 1,987,139 to 1,987,215
_RS09450
DZA65_RS09455: DZA65_RS09455 - DUF3413 domain-containing protein, at 1,987,294 to 1,989,066
_RS09455
DZA65_RS09460: DZA65_RS09460 - YejL family protein, at 1,989,080 to 1,989,310
_RS09460
DZA65_RS09465: DZA65_RS09465 - nucleoid-associated protein YejK, at 1,989,472 to 1,990,482
_RS09465
Group
Condition
DZA65
_RS09445
DZA65
_RS09450
DZA65
_RS09455
DZA65
_RS09460
DZA65
_RS09465
plant
Stem-Norland
-0.6
N.D.
-3.7
-0.4
-0.6
plant
Stem-Atlantic
-0.1
N.D.
-4.1
-0.2
-0.7
plant
Stem-Norland
-0.0
N.D.
-3.5
-0.9
-0.3
plant
Stem-Norland
+0.0
N.D.
-2.4
-1.0
-1.1
plant
Stem-Upstate
-0.1
N.D.
-1.2
-3.2
+0.1
plant
Stem-Norland
-0.4
N.D.
-3.7
+0.4
-0.4
plant
Stem-Atlantic
-0.1
N.D.
-3.1
+0.2
-0.6
plant
Stem-Norland
-0.1
N.D.
-2.2
-0.7
-0.7
plant
Stem-Norland
-0.2
N.D.
-2.3
-0.5
-0.3
plant
Stem-Atlantic
-0.1
N.D.
-3.8
+0.8
-0.2
plant
Stem-Atlantic
+0.1
N.D.
-3.0
-0.1
-0.3
plant
Upstate
-0.1
N.D.
-2.6
-0.8
+0.2
plant
Stem-Upstate
-0.5
N.D.
-2.5
+0.0
-0.3
stress
3.75mM_PTB
+0.1
N.D.
-2.6
-0.5
-0.3
plant
Stem-Atlantic
-0.2
N.D.
-2.2
-0.7
-0.0
plant
Stem-Upstate
-0.0
N.D.
-2.4
-0.4
-0.2
plant
Stem-Upstate
-0.2
N.D.
-3.0
-0.3
+0.6
plant
Stem-Atlantic
+0.0
N.D.
-2.8
+0.1
-0.0
plant
Upstate
+0.2
N.D.
-2.3
-0.6
+0.1
plant
Atlantic
-0.2
N.D.
-2.0
-0.6
+0.2
plant
Stem-Norland
-0.1
N.D.
-3.1
+0.6
+0.1
plant
Stem-Upstate
+0.2
N.D.
-2.7
+0.1
-0.1
plant
Stem-Upstate
-0.0
N.D.
-2.8
+0.2
+0.3
plant
Atlantic
+0.0
N.D.
-2.4
-0.4
+0.3
plant
Stem-Atlantic
+0.1
N.D.
-2.9
+0.4
+0.1
stress
1.88mM_PTB
-0.2
N.D.
-1.5
-0.6
+0.7
control
LB
-0.1
N.D.
-2.0
-0.2
+0.7
carbon source
M9+glycerol
+0.4
N.D.
-2.7
+0.3
+0.7
plant
Stem-Norland
+0.3
N.D.
-2.6
+0.6
+0.3
carbon source
M9+glycerol
+0.0
N.D.
-2.1
+0.4
+0.4
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