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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS09375 and DZA65_RS09380 overlap by 11 nucleotides
DZA65_RS09380 and DZA65_RS09385 are separated by 359 nucleotides
DZA65_RS09385 and DZA65_RS09390 are separated by 323 nucleotides
DZA65_RS09390 and DZA65_RS09395 are separated by 132 nucleotides
DZA65_RS09375: DZA65_RS09375 - type II toxin-antitoxin system RelE/ParE family toxin, at 1,974,275 to 1,974,343
_RS09375
DZA65_RS09380: DZA65_RS09380 - hypothetical protein, at 1,974,333 to 1,974,578
_RS09380
DZA65_RS09385: DZA65_RS09385 - glycoside hydrolase family 3 protein, at 1,974,938 to 1,976,731
_RS09385
DZA65_RS09390: DZA65_RS09390 - hypothetical protein, at 1,977,055 to 1,977,414
_RS09390
DZA65_RS09395: DZA65_RS09395 - plasmid stabilization protein, at 1,977,547 to 1,977,900
_RS09395
Group
Condition
DZA65
_RS09375
DZA65
_RS09380
DZA65
_RS09385
DZA65
_RS09390
DZA65
_RS09395
plant
Stem-Upstate
-0.4
-0.8
+0.3
-1.0
-1.5
plant
Stem-Upstate
-0.5
-0.6
+0.1
-1.0
-0.9
plant
Stem-Upstate
-2.7
+0.4
-0.3
+0.1
-0.5
plant
Stem-Upstate
-2.2
-0.4
+0.1
-1.1
+0.8
plant
Norland
-0.7
+0.0
-0.0
-0.3
-1.2
control
PDB
-0.4
-0.1
-0.1
-0.4
-1.0
plant
Stem-Norland
-1.6
+0.0
+0.0
+0.1
-0.4
carbon source
M9+sucrose
-1.1
+0.1
-0.1
-0.3
-0.5
carbon source
M9+glycerol
-1.1
-0.1
+0.0
+0.2
-0.7
control
LB
-0.8
-0.3
-0.0
-0.2
-0.2
carbon source
M9+starch
-1.5
-0.1
+0.0
+0.3
-0.3
control
LB
-1.2
-0.0
+0.1
+0.1
-0.4
plant
Stem-Norland
-1.2
+0.4
+0.0
+0.9
-1.2
control
LB
-1.2
+0.3
-0.0
+0.5
-0.6
control
PDB
+0.5
+0.0
-0.1
-0.4
-1.0
plant
Stem-Norland
-1.3
+0.3
-0.0
+0.1
-0.0
plant
Stem-Norland
-0.8
+0.4
+0.1
+0.2
-0.9
carbon source
M9+glycerol
-1.5
+0.2
+0.2
+0.4
-0.2
stress
3.75mM_PTB
+0.6
-0.4
-0.1
-0.3
-0.7
plant
Stem-Atlantic
-0.9
+0.1
+0.1
+0.3
-0.4
plant
Upstate
-0.5
+0.3
-0.1
+0.4
-0.4
plant
Atlantic
-0.7
+0.6
-0.0
+0.3
-0.3
plant
Stem-Norland
+0.1
+1.1
+0.1
+0.3
-1.3
control
LB
+0.7
+0.2
+0.0
+0.2
-0.6
plant
Stem-Norland
-0.6
+0.3
-0.1
+0.7
+0.4
stress
1.88mM_PTB
+0.8
-0.2
-0.1
+0.3
+0.1
stress
3.75mM_PTB
+1.3
-0.0
-0.0
+0.2
+0.1
plant
Stem-Norland
+1.5
+0.1
+0.2
-0.4
-0.0
plant
Stem-Atlantic
+0.9
+0.4
+0.0
+0.4
+0.4
plant
Stem-Atlantic
+1.0
+0.3
+0.1
+0.3
+0.8
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DZA65_RS09385
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