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Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS09070 and DZA65_RS09075 are separated by 448 nucleotides
DZA65_RS09075 and DZA65_RS09080 are separated by 4 nucleotides
DZA65_RS09080 and DZA65_RS09085 are separated by 175 nucleotides
DZA65_RS09085 and DZA65_RS09090 are separated by 19 nucleotides
DZA65_RS09070: DZA65_RS09070 - secretion protein HlyD, at 1,910,739 to 1,911,743
_RS09070
DZA65_RS09075: DZA65_RS09075 - ATP-dependent RNA helicase RhlE, at 1,912,192 to 1,913,550
_RS09075
DZA65_RS09080: DZA65_RS09080 - EamA family transporter, at 1,913,555 to 1,914,451
_RS09080
DZA65_RS09085: DZA65_RS09085 - helix-turn-helix transcriptional regulator, at 1,914,627 to 1,915,442
_RS09085
DZA65_RS09090: DZA65_RS09090 - EamA/RhaT family transporter, at 1,915,462 to 1,915,635
_RS09090
Group
Condition
DZA65
_RS09070
DZA65
_RS09075
DZA65
_RS09080
DZA65
_RS09085
DZA65
_RS09090
stress
3.75mM_PTB
-0.1
-0.3
-0.0
-0.2
-0.2
stress
3.75mM_PTB
-0.1
-0.3
+0.1
-0.3
-0.0
plant
Upstate
+0.0
-0.4
-0.0
+0.1
-0.3
plant
Stem-Upstate
-0.5
-0.3
-0.0
+0.7
-0.3
stress
1.88mM_PTB
-0.1
-0.4
+0.1
-0.1
+0.1
plant
Stem-Norland
-0.4
-0.1
-0.1
+0.4
-0.2
plant
Atlantic
-0.3
-0.2
+0.1
+0.2
-0.2
plant
Norland
+0.1
-0.3
-0.2
+0.4
-0.1
carbon source
M9+starch
+0.2
-0.2
+0.0
-0.2
+0.1
plant
Stem-Atlantic
+0.2
-0.2
-0.1
-0.2
+0.3
plant
Atlantic
+0.0
-0.4
-0.0
+0.3
+0.1
plant
Stem-Norland
-0.1
-0.6
+0.1
+0.3
+0.4
plant
Stem-Norland
+0.3
-0.1
-0.1
-0.3
+0.1
plant
Stem-Norland
+0.4
-0.3
-0.0
-0.2
+0.2
plant
Norland
+0.0
-0.3
-0.0
+0.4
+0.0
plant
Atlantic
-0.2
-0.3
+0.0
+0.3
+0.3
control
LB
-0.4
+0.1
+0.2
+0.1
+0.2
plant
Stem-Upstate
-0.1
-0.2
+0.1
-0.0
+0.3
carbon source
M9+glycerol
+0.1
-0.2
+0.2
-0.1
+0.1
carbon source
M9+sucrose
+0.2
-0.3
+0.1
+0.0
+0.2
plant
Stem-Norland
+0.2
-0.3
-0.1
+0.2
+0.3
plant
Stem-Upstate
+0.5
-0.2
-0.0
-0.1
+0.3
plant
Stem-Atlantic
-0.1
+0.3
+0.0
-0.1
+0.2
plant
Atlantic
+0.2
-0.3
+0.1
+0.3
+0.1
plant
Stem-Norland
+0.2
-0.2
+0.0
+0.0
+0.4
plant
Norland
+0.3
-0.1
-0.1
+0.2
+0.1
control
PDB
+0.4
-0.1
-0.0
+0.2
-0.0
plant
Norland
+0.3
-0.0
-0.1
+0.2
+0.2
plant
Stem-Norland
+0.6
-0.1
-0.2
+0.1
+0.3
plant
Stem-Upstate
+0.4
-0.0
+0.0
+0.2
+0.1
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