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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS08980 and DZA65_RS08990 are separated by 733 nucleotides
DZA65_RS08990 and DZA65_RS08995 are separated by 2 nucleotides
DZA65_RS08995 and DZA65_RS09000 are separated by 494 nucleotides
DZA65_RS09000 and DZA65_RS09005 are separated by 31 nucleotides
DZA65_RS08980: DZA65_RS08980 - ATP-dependent dethiobiotin synthetase BioD, at 1,891,942 to 1,892,622
_RS08980
DZA65_RS08990: DZA65_RS08990 - excinuclease ABC subunit B, at 1,893,356 to 1,895,368
_RS08990
DZA65_RS08995: DZA65_RS08995 - uridine diphosphate-N-acetylglucosamine-binding protein YvcK, at 1,895,371 to 1,896,330
_RS08995
DZA65_RS09000: DZA65_RS09000 - GTP 3',8-cyclase MoaA, at 1,896,825 to 1,897,814
_RS09000
DZA65_RS09005: DZA65_RS09005 - molybdenum cofactor biosynthesis protein B, at 1,897,846 to 1,898,358
_RS09005
Group
Condition
DZA65
_RS08980
DZA65
_RS08990
DZA65
_RS08995
DZA65
_RS09000
DZA65
_RS09005
plant
Stem-Upstate
-0.6
-0.5
-0.0
-2.0
-0.7
plant
Stem-Upstate
-0.9
-0.2
+0.6
-2.7
+0.2
plant
Stem-Upstate
-0.6
-0.2
+0.5
-2.4
-0.2
plant
Stem-Atlantic
-0.3
-0.6
-0.2
-0.4
-1.1
plant
Stem-Norland
-0.3
-0.3
-0.1
-1.0
-0.7
plant
Stem-Norland
-0.6
-0.5
-0.1
-0.7
-0.4
plant
Stem-Atlantic
-0.0
-0.3
-0.1
-1.4
-0.4
plant
Stem-Atlantic
-0.6
-0.2
+0.1
-0.3
-0.9
plant
Stem-Norland
-0.1
-0.4
+0.3
-0.8
-0.8
plant
Stem-Upstate
-0.5
-0.2
-0.2
-0.3
-0.6
plant
Stem-Atlantic
-0.6
-0.2
-0.1
-0.3
-0.6
plant
Stem-Norland
+0.2
-0.1
-0.0
-1.0
-0.7
plant
Atlantic
-0.6
-0.1
-0.3
-0.8
+0.3
plant
Norland
-0.4
-0.0
-0.2
-0.7
-0.2
plant
Stem-Atlantic
-0.5
-0.4
+0.1
-0.5
-0.1
plant
Stem-Norland
-0.2
-0.1
+0.2
-1.0
-0.2
carbon source
M9+polygalacturonate
-1.5
-0.0
+0.4
+0.1
-0.2
plant
Stem-Atlantic
-0.6
-0.2
+0.1
-0.4
-0.1
plant
Upstate
-0.3
+0.0
+0.0
-0.6
-0.2
control
LB
+0.2
-0.0
+0.1
-1.0
-0.3
carbon source
M9+polygalacturonate
-1.4
-0.0
+0.4
+0.1
-0.1
plant
Stem-Norland
+0.1
-0.3
-0.2
-0.3
-0.2
carbon source
M9+polygalacturonate
-1.0
-0.1
+0.2
+0.2
-0.3
control
LB
-0.0
-0.1
+0.2
-0.7
-0.2
plant
Stem-Upstate
+0.2
-0.3
+0.6
-0.9
-0.3
plant
Stem-Norland
+0.2
-0.4
+0.3
-0.5
-0.2
plant
Stem-Norland
-0.7
-0.2
+0.3
+0.1
+0.1
control
LB
+0.1
-0.1
+0.4
+0.1
-0.4
carbon source
M9+glycerol
+0.3
+0.2
+0.0
+0.2
-0.4
carbon source
M9+glycerol
+0.1
+0.2
+0.1
+0.4
-0.4
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