Fitness for 5 genes in Dickeya dianthicola ME23

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500 ntDZA65_RS08940 and DZA65_RS08945 are separated by 222 nucleotidesDZA65_RS08945 and DZA65_RS08950 are separated by 2 nucleotidesDZA65_RS08950 and DZA65_RS08955 are separated by 153 nucleotidesDZA65_RS08955 and DZA65_RS22840 overlap by 39 nucleotides DZA65_RS08940: DZA65_RS08940 - cytidine deaminase, at 1,884,507 to 1,885,394 _RS08940 DZA65_RS08945: DZA65_RS08945 - CidB/LrgB family autolysis modulator, at 1,885,617 to 1,886,312 _RS08945 DZA65_RS08950: DZA65_RS08950 - CidA/LrgA family protein, at 1,886,315 to 1,886,725 _RS08950 DZA65_RS08955: DZA65_RS08955 - glycoside hydrolase family 3 protein, at 1,886,879 to 1,887,241 _RS08955 DZA65_RS22840: DZA65_RS22840 - hypothetical protein, at 1,887,203 to 1,887,418 _RS22840
Group Condition DZA65_RS08940 DZA65_RS08945 DZA65_RS08950 DZA65_RS08955 DZA65_RS22840
plant Stem-Upstate +0.5 +0.4 -0.4 -0.2 -3.6
plant Stem-Atlantic +0.1 -0.5 -0.2 -0.1 -1.2
plant Norland -0.1 -0.3 +0.3 -0.2 -1.5
plant Upstate -0.1 -0.3 +0.1 -0.4 -0.8
plant Stem-Norland +0.1 +0.4 -0.5 -0.5 -0.9
plant Stem-Norland -0.1 +0.2 -0.1 -0.1 -1.2
plant Stem-Upstate -0.1 -0.5 -0.4 +0.1 -0.3
plant Norland -0.0 -0.0 +0.1 -0.5 -0.5
plant Atlantic -0.2 +0.3 -0.1 -0.6 -0.2
plant Stem-Norland +0.0 +0.3 +0.1 -0.4 -0.9
plant Stem-Upstate -0.5 -0.2 +0.0 -0.3 +0.2
carbon source M9+glycerol +0.0 -0.3 +0.2 +0.0 -0.6
plant Stem-Norland +0.2 -0.2 -0.2 +0.0 -0.5
stress 3.75mM_PTB +0.1 -0.4 +0.0 +0.5 -0.7
plant Stem-Upstate +0.3 -0.0 -0.5 +0.0 -0.2
plant Atlantic -0.3 +0.3 +0.2 -0.3 -0.1
control LB -0.3 -0.4 -0.1 +0.3 +0.1
plant Stem-Atlantic +0.3 +0.2 +0.1 -0.2 -0.7
plant Stem-Upstate -0.0 -1.0 -0.5 -0.0 +1.3
plant Stem-Upstate +0.4 -0.1 -0.4 -0.2 +0.4
plant Stem-Norland +0.5 -0.2 -0.1 -0.4 +0.1
plant Stem-Upstate +0.4 -0.2 +0.2 -0.2 -0.1
stress 1.88mM_PTB +0.1 -0.6 +0.0 +0.2 +0.4
control LB +0.3 -0.5 +0.1 +0.1 +0.3
control PDB +0.0 +0.0 +0.1 -0.4 +0.6
carbon source M9+polygalacturonate +0.0 -0.1 -0.1 +0.0 +0.9
plant Norland -0.0 +0.3 -0.0 -0.1 +0.7
plant Stem-Norland +0.3 +0.3 -0.2 -0.0 +0.4
carbon source M9+starch +0.1 +0.1 +0.1 -0.1 +0.6
carbon source M9+sucrose +0.1 +0.2 +0.3 +0.0 +0.6
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