Fitness for 5 genes in Dickeya dianthicola ME23

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Top 30 experiments (either direction), sorted by average fitness

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500 ntDZA65_RS08705 and DZA65_RS08710 are separated by 6 nucleotidesDZA65_RS08710 and DZA65_RS08715 are separated by 6 nucleotidesDZA65_RS08715 and DZA65_RS08720 are separated by 230 nucleotidesDZA65_RS08720 and DZA65_RS08725 are separated by 13 nucleotides DZA65_RS08705: DZA65_RS08705 - ABC transporter permease subunit, at 1,843,899 to 1,844,780 _RS08705 DZA65_RS08710: DZA65_RS08710 - ABC transporter ATP-binding protein, at 1,844,787 to 1,845,599 _RS08710 DZA65_RS08715: DZA65_RS08715 - ABC transporter ATP-binding protein, at 1,845,606 to 1,846,364 _RS08715 DZA65_RS08720: DZA65_RS08720 - MarR family transcriptional regulator, at 1,846,595 to 1,847,065 _RS08720 DZA65_RS08725: DZA65_RS08725 - HlyD family efflux transporter periplasmic adaptor subunit, at 1,847,079 to 1,848,257 _RS08725
Group Condition DZA65_RS08705 DZA65_RS08710 DZA65_RS08715 DZA65_RS08720 DZA65_RS08725
stress 1.88mM_PTB -0.2 -0.4 -0.2 -0.4 -0.1
plant Stem-Upstate -0.3 -0.2 -0.1 -0.7 +0.0
plant Atlantic -0.2 -0.0 -0.2 -0.6 +0.1
control LB -0.2 -0.2 -0.0 -0.5 +0.0
plant Stem-Norland -0.1 -0.8 +0.2 -0.2 +0.1
carbon source M9+starch -0.0 -0.2 -0.1 -0.4 -0.1
plant Stem-Upstate -0.2 -0.1 -0.0 -0.6 +0.1
plant Stem-Upstate +0.3 -0.5 +0.0 -0.3 -0.2
plant Stem-Norland -0.2 +0.2 -0.2 -0.4 -0.1
plant Upstate -0.0 -0.2 +0.2 -0.6 -0.0
plant Stem-Norland -0.2 +0.1 -0.1 -0.3 -0.0
plant Stem-Norland -0.0 +0.2 +0.1 -0.8 +0.0
plant Atlantic +0.1 -0.1 -0.0 -0.6 +0.1
carbon source M9+starch +0.1 -0.4 -0.1 -0.2 -0.0
plant Upstate -0.1 -0.3 +0.1 -0.3 +0.1
plant Stem-Upstate +0.3 -0.4 +0.3 -0.6 -0.0
plant Norland -0.1 +0.1 -0.0 -0.4 +0.1
plant Stem-Atlantic +0.1 -0.2 +0.1 -0.4 -0.1
plant Atlantic -0.0 +0.2 -0.1 -0.5 +0.1
stress 3.75mM_PTB +0.1 -0.1 +0.2 -0.4 -0.0
plant Norland -0.2 -0.1 +0.2 -0.3 +0.2
plant Stem-Upstate +0.2 +0.1 +0.3 -0.8 +0.1
plant Stem-Norland -0.1 +0.2 +0.1 -0.4 +0.1
control LB +0.0 -0.3 -0.1 +0.2 +0.1
plant Stem-Norland -0.4 +0.2 +0.1 +0.2 +0.0
plant Stem-Upstate -0.2 +0.2 +0.2 -0.3 +0.2
carbon source M9+sucrose -0.0 -0.3 +0.2 +0.3 -0.1
plant Stem-Atlantic +0.2 -0.2 -0.0 +0.3 -0.1
plant Stem-Norland +0.1 +0.5 +0.1 -0.5 +0.2
plant Stem-Upstate +0.1 +0.3 +0.1 +0.4 -0.0
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DZA65_RS08705
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DZA65_RS08710
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DZA65_RS08725
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