Fitness for 5 genes in Dickeya dianthicola ME23

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Top 30 experiments (either direction), sorted by average fitness

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500 ntDZA65_RS08340 and DZA65_RS08345 are separated by 3 nucleotidesDZA65_RS08345 and DZA65_RS08350 overlap by 4 nucleotidesDZA65_RS08350 and DZA65_RS08355 are separated by 240 nucleotidesDZA65_RS08355 and DZA65_RS08360 are separated by 4 nucleotides DZA65_RS08340: DZA65_RS08340 - thioredoxin, at 1,757,269 to 1,759,062 _RS08340 DZA65_RS08345: DZA65_RS08345 - ABC transporter ATP-binding protein, at 1,759,066 to 1,759,887 _RS08345 DZA65_RS08350: DZA65_RS08350 - ABC transporter permease subunit, at 1,759,884 to 1,761,488 _RS08350 DZA65_RS08355: DZA65_RS08355 - ABC transporter substrate-binding protein, at 1,761,729 to 1,762,826 _RS08355 DZA65_RS08360: DZA65_RS08360 - LysR family transcriptional regulator, at 1,762,831 to 1,763,757 _RS08360
Group Condition DZA65_RS08340 DZA65_RS08345 DZA65_RS08350 DZA65_RS08355 DZA65_RS08360
plant Stem-Norland +0.1 -0.3 -0.0 -0.1 -0.5
plant Stem-Upstate -0.1 -0.1 +0.1 -0.3 -0.4
plant Upstate +0.0 -0.4 -0.0 -0.1 -0.3
plant Stem-Upstate -0.1 +0.4 -0.3 -0.0 -0.7
control LB -0.0 -0.2 -0.1 -0.0 -0.3
plant Stem-Atlantic -0.1 -0.1 -0.3 +0.1 -0.2
control LB -0.3 -0.3 +0.0 -0.1 +0.0
plant Upstate +0.0 -0.2 -0.1 -0.1 -0.3
plant Stem-Upstate -0.1 -0.1 -0.1 +0.0 -0.4
carbon source M9+glycerol +0.0 -0.2 -0.4 +0.0 -0.1
plant Stem-Norland +0.0 +0.2 -0.3 -0.4 -0.1
plant Stem-Norland -0.1 -0.3 +0.1 -0.4 +0.0
plant Stem-Norland -0.0 -0.4 -0.1 -0.2 +0.1
plant Norland +0.1 -0.2 -0.2 -0.1 -0.2
plant Atlantic +0.0 +0.0 -0.1 -0.2 -0.3
plant Stem-Atlantic +0.1 -0.4 -0.2 +0.0 -0.0
plant Stem-Norland +0.0 -0.0 -0.3 -0.3 +0.0
carbon source M9+starch -0.0 +0.2 -0.3 -0.4 +0.1
plant Stem-Upstate -0.1 -0.3 -0.2 +0.1 -0.1
control LB -0.1 -0.3 -0.1 +0.2 -0.0
stress 3.75mM_PTB -0.0 -0.3 -0.1 -0.1 +0.2
control LB -0.1 -0.2 -0.3 -0.1 +0.3
control PDB +0.1 -0.0 +0.2 -0.0 -0.3
plant Stem-Atlantic -0.1 -0.3 +0.2 +0.1 +0.0
plant Upstate +0.2 +0.1 +0.1 -0.1 -0.2
stress 1.88mM_PTB -0.0 +0.2 -0.2 +0.0 +0.2
carbon source M9+glycerol +0.0 +0.3 +0.0 +0.0 -0.3
plant Stem-Upstate +0.0 +0.3 +0.1 +0.1 -0.3
carbon source M9+glycerol +0.1 +0.5 +0.0 -0.0 -0.0
plant Stem-Atlantic -0.0 +0.5 +0.0 +0.0 +0.1
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DZA65_RS08340
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DZA65_RS08345
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