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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS07800 and DZA65_RS07805 are separated by 7 nucleotides
DZA65_RS07805 and DZA65_RS07810 are separated by 134 nucleotides
DZA65_RS07810 and DZA65_RS07815 overlap by 8 nucleotides
DZA65_RS07815 and DZA65_RS07820 overlap by 4 nucleotides
DZA65_RS07800: DZA65_RS07800 - DUF4160 domain-containing protein, at 1,628,439 to 1,628,696
_RS07800
DZA65_RS07805: DZA65_RS07805 - addiction module antitoxin, at 1,628,704 to 1,629,192
_RS07805
DZA65_RS07810: DZA65_RS07810 - hydrogenase maturation peptidase HycI, at 1,629,327 to 1,629,824
_RS07810
DZA65_RS07815: DZA65_RS07815 - HycH family protein, at 1,629,817 to 1,630,215
_RS07815
DZA65_RS07820: DZA65_RS07820 - NADH-quinone oxidoreductase subunit B family protein, at 1,630,212 to 1,631,003
_RS07820
Group
Condition
DZA65
_RS07800
DZA65
_RS07805
DZA65
_RS07810
DZA65
_RS07815
DZA65
_RS07820
control
LB
-0.8
-0.3
-0.8
-0.1
+0.1
plant
Stem-Norland
-0.2
-0.0
-0.7
+0.0
-0.7
plant
Stem-Upstate
-1.2
-0.3
-0.3
+0.1
+0.1
stress
1.88mM_PTB
-0.7
-0.2
-0.1
-0.2
-0.2
plant
Stem-Upstate
-1.4
-0.2
+0.5
-0.1
-0.1
control
LB
-0.4
-0.3
-0.1
-0.2
-0.2
plant
Stem-Atlantic
-0.5
-0.3
-0.0
-0.2
-0.1
plant
Stem-Norland
-0.2
-0.9
-0.2
-0.1
+0.2
plant
Stem-Upstate
-0.7
-0.1
+0.0
-0.0
-0.4
plant
Stem-Norland
-0.7
-0.7
-0.1
-0.1
+0.5
plant
Stem-Atlantic
-0.8
-0.3
-0.0
+0.1
-0.0
plant
Stem-Norland
-0.6
-0.2
-0.2
+0.1
-0.1
plant
Stem-Upstate
-0.3
+0.0
-0.5
-0.1
-0.2
plant
Stem-Upstate
-1.1
-0.3
+0.7
-0.2
+0.1
carbon source
M9+sucrose
-0.1
-0.2
-0.7
-0.0
+0.2
control
PDB
-0.6
-0.5
+0.1
+0.2
+0.1
plant
Stem-Atlantic
-0.5
-0.5
+0.5
-0.1
-0.0
plant
Stem-Norland
+0.2
-0.5
+0.2
-0.1
-0.3
stress
1.88mM_PTB
+0.3
-0.3
+0.1
-0.1
-0.3
plant
Stem-Atlantic
-0.6
-0.2
+0.3
+0.1
+0.2
control
PDB
-0.1
-0.5
+0.1
+0.1
+0.2
plant
Stem-Upstate
+0.6
-0.8
+0.7
-0.4
-0.1
plant
Stem-Atlantic
-0.7
+0.1
+0.4
-0.0
+0.4
plant
Norland
+0.2
-0.3
-0.3
+0.2
+0.3
control
PDB
+0.4
-0.6
+0.1
+0.2
+0.2
carbon source
M9+starch
+0.5
-0.0
-0.1
-0.1
+0.3
plant
Upstate
+0.5
-0.4
+0.5
+0.0
+0.0
carbon source
M9+sucrose
+0.8
-0.1
+0.0
-0.0
+0.2
carbon source
M9+starch
+0.6
-0.2
+0.1
+0.0
+0.4
plant
Atlantic
+0.9
-0.1
+0.2
-0.1
+0.2
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