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Gene
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Cofit
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS07445 and DZA65_RS07450 are separated by 79 nucleotides
DZA65_RS07450 and DZA65_RS07455 are separated by 485 nucleotides
DZA65_RS07455 and DZA65_RS07460 are separated by 239 nucleotides
DZA65_RS07460 and DZA65_RS07465 are separated by 3 nucleotides
DZA65_RS07445: DZA65_RS07445 - hypothetical protein, at 1,547,880 to 1,548,254
_RS07445
DZA65_RS07450: DZA65_RS07450 - DUF2513 domain-containing protein, at 1,548,334 to 1,548,738
_RS07450
DZA65_RS07455: DZA65_RS07455 - IS3 family transposase, at 1,549,224 to 1,550,218
_RS07455
DZA65_RS07460: DZA65_RS07460 - SDR family oxidoreductase, at 1,550,458 to 1,551,207
_RS07460
DZA65_RS07465: DZA65_RS07465 - MFS transporter, at 1,551,211 to 1,552,464
_RS07465
Group
Condition
DZA65
_RS07445
DZA65
_RS07450
DZA65
_RS07455
DZA65
_RS07460
DZA65
_RS07465
carbon source
M9+polygalacturonate
+0.1
-0.6
-0.1
-2.3
-0.8
plant
Stem-Upstate
+0.3
-0.5
+0.4
-2.5
-1.0
plant
Stem-Norland
+0.3
-0.1
-0.1
-2.5
-0.8
plant
Stem-Norland
-0.1
-0.5
+0.1
-1.9
-0.7
carbon source
M9+polygalacturonate
-0.0
-0.1
-0.0
-2.0
-0.7
carbon source
M9+polygalacturonate
-0.0
-0.1
+0.1
-2.1
-0.8
plant
Stem-Atlantic
+0.0
-0.1
-0.2
-1.6
-1.0
plant
Stem-Upstate
-0.6
-1.1
+0.7
-1.2
-0.6
plant
Stem-Atlantic
-0.2
-0.5
+0.0
-1.4
-0.6
plant
Stem-Norland
-0.5
+0.1
-0.0
-1.4
-0.3
plant
Stem-Norland
+0.2
-0.3
+0.2
-1.7
-0.6
plant
Stem-Norland
+0.1
-0.2
-0.0
-1.3
-0.6
plant
Stem-Upstate
-0.3
+0.1
+0.1
-1.5
-0.4
plant
Stem-Norland
+0.0
+0.4
+0.2
-1.6
-1.0
plant
Stem-Upstate
+0.4
+0.6
-0.3
-1.8
-0.9
plant
Stem-Atlantic
+0.3
+0.3
+0.1
-1.7
-0.8
plant
Stem-Upstate
+0.1
+0.1
+0.0
-1.3
-0.5
plant
Stem-Norland
+0.0
+0.1
+0.3
-1.1
-0.9
plant
Stem-Atlantic
+0.3
-0.1
-0.0
-1.3
-0.4
carbon source
M9+glycerol
-0.2
+0.0
+0.1
-1.5
+0.1
plant
Stem-Atlantic
-0.0
+0.1
+0.2
-1.2
-0.4
carbon source
M9+glycerol
-0.0
+0.2
-0.0
-1.7
+0.2
plant
Stem-Atlantic
+0.2
+0.4
+0.1
-1.1
-0.8
plant
Atlantic
+0.3
-0.4
-0.0
-0.8
-0.3
plant
Stem-Norland
+0.4
+0.4
-0.1
-1.3
-0.6
plant
Atlantic
-0.2
+0.4
-0.3
-0.5
-0.4
plant
Stem-Atlantic
+0.0
+0.5
+0.3
-1.5
-0.3
plant
Upstate
-0.2
+0.6
-0.2
-0.8
-0.2
plant
Stem-Upstate
-0.0
+1.3
-0.1
-1.0
-0.5
plant
Stem-Upstate
+0.1
+0.6
+0.3
-1.0
-0.4
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