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Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS07370 and DZA65_RS07375 are separated by 107 nucleotides
DZA65_RS07375 and DZA65_RS07380 are separated by 233 nucleotides
DZA65_RS07380 and DZA65_RS07385 are separated by 147 nucleotides
DZA65_RS07385 and DZA65_RS07390 are separated by 118 nucleotides
DZA65_RS07370: DZA65_RS07370 - AraC family transcriptional regulator, at 1,535,100 to 1,535,999
_RS07370
DZA65_RS07375: DZA65_RS07375 - LysE family translocator, at 1,536,107 to 1,536,709
_RS07375
DZA65_RS07380: DZA65_RS07380 - Lrp/AsnC family transcriptional regulator, at 1,536,943 to 1,537,443
_RS07380
DZA65_RS07385: DZA65_RS07385 - ATP-dependent helicase, at 1,537,591 to 1,538,235
_RS07385
DZA65_RS07390: DZA65_RS07390 - ATP-dependent helicase, at 1,538,354 to 1,538,842
_RS07390
Group
Condition
DZA65
_RS07370
DZA65
_RS07375
DZA65
_RS07380
DZA65
_RS07385
DZA65
_RS07390
control
LB
-0.2
+0.0
+0.0
-0.2
-0.9
plant
Stem-Norland
+0.1
-0.1
-0.4
-0.1
-0.4
plant
Atlantic
-0.0
-0.1
-0.0
-0.0
-0.7
plant
Upstate
+0.0
-0.1
-0.2
-0.1
-0.5
plant
Atlantic
-0.1
-0.2
-0.2
-0.0
-0.3
carbon source
M9+sucrose
-0.3
+0.0
-0.3
+0.1
-0.4
plant
Upstate
+0.1
-0.3
-0.0
-0.2
-0.3
plant
Upstate
+0.1
-0.1
-0.1
-0.2
-0.4
plant
Atlantic
+0.0
-0.3
-0.0
-0.0
-0.4
plant
Norland
+0.0
-0.0
+0.1
-0.1
-0.6
plant
Stem-Upstate
+0.1
+0.6
-0.2
-0.4
-0.6
carbon source
M9+starch
-0.1
+0.1
-0.2
-0.0
-0.3
plant
Atlantic
+0.2
+0.0
-0.1
-0.1
-0.5
plant
Stem-Upstate
-0.2
-0.3
-0.1
-0.1
+0.3
plant
Norland
-0.1
-0.1
+0.2
-0.0
-0.3
plant
Stem-Upstate
+0.0
-0.0
+0.1
+0.2
-0.6
plant
Stem-Norland
+0.3
+0.2
-0.0
-0.1
-0.6
plant
Upstate
+0.0
-0.3
-0.2
+0.2
+0.1
control
LB
+0.2
+0.1
-0.1
+0.1
-0.4
plant
Stem-Norland
+0.2
+0.2
+0.1
+0.1
-0.7
stress
1.88mM_PTB
+0.1
+0.2
+0.2
-0.1
-0.5
plant
Stem-Norland
+0.3
+0.2
+0.2
+0.1
-0.7
plant
Stem-Norland
+0.1
+0.3
+0.2
+0.2
-0.7
plant
Stem-Upstate
-0.0
+0.2
-0.2
-0.2
+0.3
plant
Stem-Atlantic
+0.3
+0.0
+0.3
+0.1
-0.4
plant
Stem-Upstate
+0.3
+0.2
+0.1
+0.2
-0.4
stress
1.88mM_PTB
+0.2
+0.1
+0.2
-0.2
+0.2
plant
Stem-Atlantic
+0.1
+0.3
+0.2
+0.2
-0.0
stress
1.88mM_PTB
+0.0
+0.1
+0.2
-0.0
+0.5
plant
Stem-Atlantic
+0.0
+0.1
+0.2
+0.3
+0.4
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