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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS07030 and DZA65_RS07035 are separated by 76 nucleotides
DZA65_RS07035 and DZA65_RS07040 are separated by 24 nucleotides
DZA65_RS07040 and DZA65_RS07045 are separated by 236 nucleotides
DZA65_RS07045 and DZA65_RS07050 are separated by 291 nucleotides
DZA65_RS07030: DZA65_RS07030 - 6-phosphogluconolactonase, at 1,455,660 to 1,456,655
_RS07030
DZA65_RS07035: DZA65_RS07035 - hypothetical protein, at 1,456,732 to 1,457,982
_RS07035
DZA65_RS07040: DZA65_RS07040 - sugar ABC transporter substrate-binding protein, at 1,458,007 to 1,459,083
_RS07040
DZA65_RS07045: DZA65_RS07045 - hypothetical protein, at 1,459,320 to 1,459,748
_RS07045
DZA65_RS07050: DZA65_RS07050 - methionine--tRNA ligase, at 1,460,040 to 1,462,070
_RS07050
Group
Condition
DZA65
_RS07030
DZA65
_RS07035
DZA65
_RS07040
DZA65
_RS07045
DZA65
_RS07050
carbon source
M9+glycerol
-1.1
-0.0
-0.1
+0.1
N.D.
plant
Stem-Atlantic
-0.7
+0.0
+0.1
-0.6
N.D.
carbon source
M9+glycerol
-0.4
-0.5
-0.0
-0.1
N.D.
plant
Stem-Atlantic
-0.8
-0.0
-0.1
-0.0
N.D.
plant
Stem-Norland
-0.8
-0.0
+0.1
-0.2
N.D.
carbon source
M9+polygalacturonate
-0.9
+0.1
+0.1
-0.1
N.D.
plant
Stem-Atlantic
-0.6
+0.1
-0.2
-0.0
N.D.
control
LB
-0.6
-0.1
+0.2
-0.1
N.D.
carbon source
M9+glycerol
-0.4
-0.3
-0.0
+0.2
N.D.
plant
Atlantic
-0.6
+0.2
+0.1
-0.0
N.D.
plant
Atlantic
-0.7
+0.1
+0.2
+0.0
N.D.
plant
Upstate
-0.6
+0.0
+0.3
-0.1
N.D.
carbon source
M9+polygalacturonate
-0.6
+0.0
+0.2
+0.1
N.D.
plant
Stem-Upstate
-0.7
-0.0
+0.1
+0.3
N.D.
plant
Upstate
-0.5
+0.4
-0.0
-0.2
N.D.
carbon source
M9+polygalacturonate
-0.5
-0.1
+0.2
+0.1
N.D.
plant
Upstate
-0.6
+0.2
+0.1
+0.2
N.D.
plant
Upstate
-0.6
+0.3
+0.2
-0.1
N.D.
carbon source
M9+sucrose
-0.8
+0.1
+0.2
+0.4
N.D.
plant
Stem-Norland
-1.1
+0.4
+0.4
+0.3
N.D.
plant
Norland
-0.3
+0.3
+0.2
-0.1
N.D.
plant
Stem-Upstate
-0.5
+0.4
+0.2
-0.0
N.D.
plant
Stem-Upstate
-0.3
+0.2
+0.4
-0.3
N.D.
plant
Stem-Norland
-0.5
+0.4
+0.1
+0.1
N.D.
plant
Upstate
-0.5
+0.3
+0.1
+0.2
N.D.
plant
Atlantic
-0.4
+0.3
+0.1
+0.2
N.D.
plant
Stem-Upstate
-0.3
+0.5
+0.2
-0.2
N.D.
plant
Stem-Upstate
-0.3
+0.4
+0.0
+0.0
N.D.
plant
Atlantic
+0.2
+0.3
+0.1
+0.2
N.D.
plant
Stem-Norland
+0.4
+0.5
+0.0
+0.3
N.D.
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