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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS22825 and DZA65_RS06975 are separated by 173 nucleotides
DZA65_RS06975 and DZA65_RS06980 overlap by 11 nucleotides
DZA65_RS06980 and DZA65_RS06985 overlap by 4 nucleotides
DZA65_RS06985 and DZA65_RS06990 are separated by 78 nucleotides
DZA65_RS22825: DZA65_RS22825 - hypothetical protein, at 1,444,085 to 1,444,378
_RS22825
DZA65_RS06975: DZA65_RS06975 - galactose-1-epimerase, at 1,444,552 to 1,445,634
_RS06975
DZA65_RS06980: DZA65_RS06980 - galactokinase, at 1,445,624 to 1,446,775
_RS06980
DZA65_RS06985: DZA65_RS06985 - galactose-1-phosphate uridylyltransferase, at 1,446,772 to 1,447,824
_RS06985
DZA65_RS06990: DZA65_RS06990 - UDP-glucose 4-epimerase GalE, at 1,447,903 to 1,448,919
_RS06990
Group
Condition
DZA65
_RS22825
DZA65
_RS06975
DZA65
_RS06980
DZA65
_RS06985
DZA65
_RS06990
carbon source
M9+polygalacturonate
-0.0
-0.3
-1.1
-2.1
-1.8
carbon source
M9+polygalacturonate
-0.4
-0.2
-1.0
-1.7
-1.9
plant
Stem-Norland
-0.7
-0.7
-0.7
-1.0
-1.3
carbon source
M9+polygalacturonate
-0.2
+0.1
-1.1
-1.1
-2.0
plant
Upstate
-0.3
+0.2
-0.5
-1.5
-1.4
plant
Atlantic
-0.4
+0.0
-0.3
-1.5
-1.2
plant
Stem-Norland
-0.5
+0.1
-0.7
-0.7
-1.4
plant
Stem-Atlantic
-0.5
-0.0
-0.6
-0.9
-1.0
plant
Upstate
+0.0
+0.3
-0.8
-1.0
-1.4
plant
Upstate
-0.1
-0.2
-0.3
-0.9
-1.4
plant
Stem-Atlantic
-0.5
-0.3
-0.3
-0.8
-1.1
plant
Atlantic
+0.0
+0.1
-0.6
-0.7
-1.6
plant
Stem-Norland
-0.1
-0.2
-0.8
-0.6
-1.0
plant
Stem-Norland
-0.3
-0.2
-0.4
-0.7
-1.0
plant
Stem-Atlantic
-0.1
-0.0
-0.4
-0.8
-1.3
plant
Stem-Atlantic
-0.3
-0.1
-0.4
-0.7
-1.1
plant
Upstate
+0.3
-0.0
-0.5
-0.8
-1.5
plant
Stem-Norland
-0.3
-0.2
-0.6
-0.5
-1.1
plant
Norland
-0.1
-0.0
-0.5
-0.6
-1.2
plant
Atlantic
-0.2
-0.2
-0.3
-0.7
-1.2
plant
Atlantic
-0.4
+0.2
-0.5
-0.6
-1.2
plant
Stem-Norland
+0.2
-0.2
-0.7
-0.5
-1.2
plant
Upstate
-0.2
-0.1
-0.2
-0.9
-1.1
plant
Atlantic
+0.3
+0.1
-0.4
-1.1
-1.3
plant
Upstate
-0.2
+0.3
-0.2
-0.8
-1.4
plant
Stem-Atlantic
-0.8
+0.3
-0.4
-0.3
-1.0
plant
Norland
-0.1
+0.2
-0.3
-0.8
-1.1
plant
Stem-Upstate
+0.6
+0.5
-0.8
-0.6
-0.6
plant
Stem-Upstate
+0.8
+0.4
-0.2
-0.3
-0.8
plant
Stem-Upstate
+0.9
+0.3
-0.3
+0.4
-0.4
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