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Gene
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Nearby
Cofit
Fitness for 5 genes in
Dickeya dianthicola ME23
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500 nt
DZA65_RS06650 and DZA65_RS06655 are separated by 125 nucleotides
DZA65_RS06655 and DZA65_RS06660 are separated by 8 nucleotides
DZA65_RS06660 and DZA65_RS06665 are separated by 43 nucleotides
DZA65_RS06665 and DZA65_RS06670 are separated by 38 nucleotides
DZA65_RS06650: DZA65_RS06650 - multidrug transporter, at 1,382,972 to 1,383,301
_RS06650
DZA65_RS06655: DZA65_RS06655 - tRNA-Gln, at 1,383,427 to 1,383,501
_RS06655
DZA65_RS06660: DZA65_RS06660 - tRNA-Met, at 1,383,510 to 1,383,586
_RS06660
DZA65_RS06665: DZA65_RS06665 - tRNA-Gln, at 1,383,630 to 1,383,704
_RS06665
DZA65_RS06670: DZA65_RS06670 - tRNA-Gln, at 1,383,743 to 1,383,817
_RS06670
Group
Condition
DZA65
_RS06650
DZA65
_RS06655
DZA65
_RS06660
DZA65
_RS06665
DZA65
_RS06670
plant
Atlantic
-0.1
N.D.
-1.9
N.D.
N.D.
plant
Stem-Norland
-0.1
N.D.
-1.7
N.D.
N.D.
plant
Stem-Norland
-0.1
N.D.
-1.5
N.D.
N.D.
stress
3.75mM_PTB
-0.2
N.D.
-1.1
N.D.
N.D.
plant
Stem-Upstate
+0.2
N.D.
-1.6
N.D.
N.D.
plant
Stem-Atlantic
+0.3
N.D.
-1.5
N.D.
N.D.
control
PDB
+0.0
N.D.
-1.2
N.D.
N.D.
plant
Stem-Atlantic
+0.0
N.D.
-1.2
N.D.
N.D.
control
PDB
-0.4
N.D.
-0.8
N.D.
N.D.
plant
Stem-Norland
-0.2
N.D.
-1.0
N.D.
N.D.
plant
Stem-Upstate
+0.4
N.D.
-1.5
N.D.
N.D.
carbon source
M9+glycerol
-0.1
N.D.
-1.0
N.D.
N.D.
control
PDB
-0.1
N.D.
-0.9
N.D.
N.D.
plant
Stem-Atlantic
+0.1
N.D.
-1.1
N.D.
N.D.
plant
Stem-Upstate
+0.4
N.D.
-1.4
N.D.
N.D.
plant
Atlantic
+0.3
N.D.
-1.3
N.D.
N.D.
plant
Upstate
+0.2
N.D.
-1.1
N.D.
N.D.
plant
Norland
+0.2
N.D.
-1.1
N.D.
N.D.
plant
Stem-Upstate
+0.1
N.D.
-0.9
N.D.
N.D.
control
LB
+0.0
N.D.
-0.9
N.D.
N.D.
carbon source
M9+polygalacturonate
+0.1
N.D.
-1.0
N.D.
N.D.
carbon source
M9+sucrose
+0.2
N.D.
-1.0
N.D.
N.D.
plant
Stem-Norland
+0.8
N.D.
-1.6
N.D.
N.D.
plant
Stem-Atlantic
+0.5
N.D.
-1.3
N.D.
N.D.
plant
Atlantic
+0.2
N.D.
-0.9
N.D.
N.D.
plant
Norland
+0.2
N.D.
-0.9
N.D.
N.D.
plant
Upstate
+0.5
N.D.
-0.8
N.D.
N.D.
carbon source
M9+polygalacturonate
+0.5
N.D.
-0.5
N.D.
N.D.
plant
Stem-Norland
-0.3
N.D.
+0.9
N.D.
N.D.
plant
Stem-Atlantic
+0.2
N.D.
+0.9
N.D.
N.D.
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