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Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS06640 and DZA65_RS06645 are separated by 263 nucleotides
DZA65_RS06645 and DZA65_RS06650 are separated by 180 nucleotides
DZA65_RS06650 and DZA65_RS06655 are separated by 125 nucleotides
DZA65_RS06655 and DZA65_RS06660 are separated by 8 nucleotides
DZA65_RS06640: DZA65_RS06640 - tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB, at 1,379,937 to 1,381,361
_RS06640
DZA65_RS06645: DZA65_RS06645 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase, at 1,381,625 to 1,382,791
_RS06645
DZA65_RS06650: DZA65_RS06650 - multidrug transporter, at 1,382,972 to 1,383,301
_RS06650
DZA65_RS06655: DZA65_RS06655 - tRNA-Gln, at 1,383,427 to 1,383,501
_RS06655
DZA65_RS06660: DZA65_RS06660 - tRNA-Met, at 1,383,510 to 1,383,586
_RS06660
Group
Condition
DZA65
_RS06640
DZA65
_RS06645
DZA65
_RS06650
DZA65
_RS06655
DZA65
_RS06660
plant
Stem-Norland
-0.2
N.D.
-0.1
N.D.
-1.7
plant
Atlantic
-0.0
N.D.
-0.1
N.D.
-1.9
plant
Stem-Upstate
-0.8
N.D.
+0.4
N.D.
-1.5
plant
Stem-Norland
-0.2
N.D.
-0.1
N.D.
-1.5
stress
3.75mM_PTB
-0.2
N.D.
-0.2
N.D.
-1.1
plant
Stem-Upstate
-0.5
N.D.
+0.1
N.D.
-0.9
plant
Stem-Atlantic
-0.1
N.D.
+0.3
N.D.
-1.5
control
PDB
-0.1
N.D.
+0.0
N.D.
-1.2
carbon source
M9+glycerol
-0.2
N.D.
-0.1
N.D.
-1.0
control
PDB
-0.1
N.D.
-0.4
N.D.
-0.8
plant
Upstate
-0.2
N.D.
+0.2
N.D.
-1.1
plant
Stem-Norland
-0.1
N.D.
-0.2
N.D.
-1.0
plant
Stem-Upstate
+0.1
N.D.
+0.2
N.D.
-1.6
plant
Stem-Atlantic
-0.1
N.D.
+0.1
N.D.
-1.1
plant
Stem-Atlantic
+0.1
N.D.
+0.0
N.D.
-1.2
control
LB
-0.2
N.D.
+0.0
N.D.
-0.9
control
PDB
+0.0
N.D.
-0.1
N.D.
-0.9
plant
Atlantic
-0.0
N.D.
+0.3
N.D.
-1.3
carbon source
M9+sucrose
-0.1
N.D.
+0.2
N.D.
-1.0
plant
Stem-Atlantic
-0.1
N.D.
+0.5
N.D.
-1.3
plant
Stem-Norland
-0.3
N.D.
+0.1
N.D.
-0.7
carbon source
M9+polygalacturonate
-0.0
N.D.
+0.1
N.D.
-1.0
plant
Stem-Norland
+0.0
N.D.
+0.8
N.D.
-1.6
plant
Norland
+0.1
N.D.
+0.2
N.D.
-1.1
plant
Stem-Upstate
+0.4
N.D.
+0.4
N.D.
-1.4
plant
Atlantic
+0.1
N.D.
+0.2
N.D.
-0.9
plant
Norland
+0.2
N.D.
+0.2
N.D.
-0.9
plant
Upstate
-0.0
N.D.
+0.5
N.D.
-0.8
plant
Stem-Norland
+0.1
N.D.
-0.3
N.D.
+0.9
plant
Stem-Atlantic
+0.1
N.D.
+0.2
N.D.
+0.9
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