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Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS06300 and DZA65_RS06305 overlap by 17 nucleotides
DZA65_RS06305 and DZA65_RS06310 overlap by 1 nucleotides
DZA65_RS06310 and DZA65_RS06315 overlap by 13 nucleotides
DZA65_RS06315 and DZA65_RS06320 are separated by 206 nucleotides
DZA65_RS06300: DZA65_RS06300 - 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase, at 1,313,058 to 1,313,849
_RS06300
DZA65_RS06305: DZA65_RS06305 - 1,4-dihydroxy-2-naphthoyl-CoA synthase, at 1,313,833 to 1,314,690
_RS06305
DZA65_RS06310: DZA65_RS06310 - o-succinylbenzoate synthase, at 1,314,690 to 1,315,658
_RS06310
DZA65_RS06315: DZA65_RS06315 - o-succinylbenzoate--CoA ligase, at 1,315,646 to 1,317,016
_RS06315
DZA65_RS06320: DZA65_RS06320 - membrane protein, at 1,317,223 to 1,317,768
_RS06320
Group
Condition
DZA65
_RS06300
DZA65
_RS06305
DZA65
_RS06310
DZA65
_RS06315
DZA65
_RS06320
plant
Stem-Atlantic
-1.4
-1.4
-1.0
-1.8
-0.0
plant
Stem-Norland
-0.8
-0.8
-0.7
-0.7
+0.0
plant
Stem-Upstate
-0.7
-1.1
-0.3
-0.6
-0.0
plant
Stem-Atlantic
-0.7
-1.0
-0.6
-0.5
+0.2
plant
Stem-Upstate
-1.0
-0.5
-0.3
-0.5
-0.0
plant
Stem-Upstate
-0.6
-1.1
-0.4
-0.6
+0.2
plant
Stem-Atlantic
-0.8
-0.6
-0.4
-0.5
-0.1
plant
Stem-Atlantic
-0.6
-0.6
-0.5
-0.7
+0.0
plant
Stem-Norland
-1.3
+0.1
-0.3
-0.7
-0.1
plant
Stem-Atlantic
-0.7
-0.8
-0.3
-0.3
-0.1
plant
Stem-Norland
-0.4
-0.8
-0.5
-0.4
-0.1
plant
Stem-Upstate
-0.7
-0.2
-0.4
-0.8
+0.1
plant
Stem-Atlantic
-0.6
-0.4
-0.4
-0.7
+0.1
plant
Stem-Norland
-0.0
-1.0
-0.2
-0.5
-0.1
plant
Stem-Norland
-0.3
-0.5
-0.5
-0.4
+0.0
plant
Stem-Norland
-0.3
-0.1
-0.6
-0.6
+0.0
plant
Stem-Norland
-0.7
-0.5
+0.1
-0.2
-0.3
plant
Upstate
-0.1
-0.4
-0.5
-0.3
-0.1
plant
Stem-Atlantic
-0.6
-0.8
-0.0
-0.1
+0.2
plant
Stem-Norland
-0.5
+0.2
-0.6
-0.4
+0.0
plant
Stem-Upstate
-0.9
+0.6
-0.7
-0.2
+0.3
carbon source
M9+polygalacturonate
-0.2
-0.4
-0.2
+0.1
-0.1
plant
Upstate
-0.4
-0.1
-0.2
-0.1
+0.2
control
LB
-0.1
-0.3
-0.2
-0.1
+0.2
control
LB
-0.1
-0.4
+0.2
-0.2
-0.0
stress
3.75mM_PTB
+0.3
-0.5
-0.1
-0.1
-0.1
carbon source
M9+sucrose
+0.2
-0.4
-0.2
-0.1
+0.1
plant
Stem-Upstate
+0.2
+0.2
-0.1
+0.1
-0.4
stress
1.88mM_PTB
+0.1
-0.3
+0.1
+0.2
+0.2
stress
3.75mM_PTB
-0.2
-0.0
+0.2
+0.4
+0.2
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