Fitness for 5 genes in Dickeya dianthicola ME23

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Top 30 experiments (either direction), sorted by average fitness

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500 ntDZA65_RS06285 and DZA65_RS06290 are separated by 1133 nucleotidesDZA65_RS06290 and DZA65_RS06295 are separated by 98 nucleotidesDZA65_RS06295 and DZA65_RS06300 overlap by 1 nucleotidesDZA65_RS06300 and DZA65_RS06305 overlap by 17 nucleotides DZA65_RS06285: DZA65_RS06285 - MFS transporter, at 1,308,552 to 1,308,821 _RS06285 DZA65_RS06290: DZA65_RS06290 - isochorismate synthase MenF, at 1,309,955 to 1,311,283 _RS06290 DZA65_RS06295: DZA65_RS06295 - 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase, at 1,311,382 to 1,313,058 _RS06295 DZA65_RS06300: DZA65_RS06300 - 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase, at 1,313,058 to 1,313,849 _RS06300 DZA65_RS06305: DZA65_RS06305 - 1,4-dihydroxy-2-naphthoyl-CoA synthase, at 1,313,833 to 1,314,690 _RS06305
Group Condition DZA65_RS06285 DZA65_RS06290 DZA65_RS06295 DZA65_RS06300 DZA65_RS06305
plant Stem-Atlantic -0.4 -0.4 -0.9 -1.4 -1.4
plant Stem-Atlantic -0.3 -0.4 -0.6 -0.7 -0.8
plant Stem-Upstate +0.1 +0.2 -0.8 -0.6 -1.1
plant Stem-Upstate +0.2 -0.2 -0.3 -0.7 -1.1
plant Stem-Atlantic -0.2 +0.0 -0.3 -0.7 -1.0
plant Stem-Atlantic -0.4 -0.1 -0.8 -0.6 -0.4
plant Stem-Atlantic -0.2 +0.1 -0.4 -0.8 -0.6
plant Stem-Norland -0.2 +0.1 -0.4 -0.8 -0.8
plant Stem-Upstate -0.3 -0.0 -0.7 -0.7 -0.2
plant Stem-Atlantic -0.1 +0.0 -0.7 -0.6 -0.6
plant Stem-Norland +0.1 -0.2 -0.7 -0.4 -0.8
plant Stem-Norland -0.4 -0.1 -0.3 -0.7 -0.5
plant Stem-Norland -0.3 +0.0 -0.4 -0.0 -1.0
plant Stem-Upstate +0.0 +0.0 -0.1 -1.0 -0.5
plant Stem-Atlantic +0.4 +0.1 -0.3 -0.6 -0.8
plant Stem-Norland -0.5 -0.1 -0.2 -0.5 +0.2
plant Stem-Norland +0.2 +0.0 -0.5 -0.3 -0.5
plant Stem-Upstate -0.3 -0.3 -0.2 -0.0 -0.3
plant Stem-Norland +0.4 -0.6 -0.4 -0.3 -0.1
plant Stem-Upstate -0.7 +0.1 -0.1 -0.9 +0.6
plant Stem-Norland +0.1 +0.2 -0.1 -1.3 +0.1
plant Upstate -0.4 +0.0 -0.2 -0.0 -0.4
carbon source M9+starch -0.4 +0.0 -0.1 -0.3 -0.1
stress 3.75mM_PTB -0.6 +0.1 -0.1 +0.3 -0.5
plant Upstate -0.0 +0.2 -0.3 -0.1 -0.4
plant Norland -0.5 +0.2 -0.1 -0.0 +0.1
plant Upstate +0.3 +0.0 -0.4 -0.1 -0.1
carbon source M9+polygalacturonate +0.5 +0.1 -0.1 -0.2 -0.4
control PDB -0.2 +0.0 +0.2 +0.3 -0.3
control PDB -0.2 +0.3 +0.2 +0.3 +0.0
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