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Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS06250 and DZA65_RS06255 are separated by 176 nucleotides
DZA65_RS06255 and DZA65_RS06260 are separated by 536 nucleotides
DZA65_RS06260 and DZA65_RS06265 are separated by 367 nucleotides
DZA65_RS06265 and DZA65_RS06270 are separated by 124 nucleotides
DZA65_RS06250: DZA65_RS06250 - ribonucleotide-diphosphate reductase subunit beta, at 1,294,337 to 1,295,467
_RS06250
DZA65_RS06255: DZA65_RS06255 - ribonucleoside-diphosphate reductase subunit alpha, at 1,295,644 to 1,297,932
_RS06255
DZA65_RS06260: DZA65_RS06260 - bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG, at 1,298,469 to 1,299,188
_RS06260
DZA65_RS06265: DZA65_RS06265 - DNA topoisomerase (ATP-hydrolyzing) subunit A, at 1,299,556 to 1,302,189
_RS06265
DZA65_RS06270: DZA65_RS06270 - two-component system sensor histidine kinase RcsC, at 1,302,314 to 1,305,178
_RS06270
Group
Condition
DZA65
_RS06250
DZA65
_RS06255
DZA65
_RS06260
DZA65
_RS06265
DZA65
_RS06270
control
PDB
N.D.
N.D.
N.D.
N.D.
-0.4
plant
Stem-Upstate
N.D.
N.D.
N.D.
N.D.
-0.4
control
PDB
N.D.
N.D.
N.D.
N.D.
-0.2
plant
Stem-Norland
N.D.
N.D.
N.D.
N.D.
-0.2
plant
Stem-Norland
N.D.
N.D.
N.D.
N.D.
-0.2
carbon source
M9+polygalacturonate
N.D.
N.D.
N.D.
N.D.
+0.2
plant
Stem-Atlantic
N.D.
N.D.
N.D.
N.D.
+0.2
control
PDB
N.D.
N.D.
N.D.
N.D.
+0.2
plant
Stem-Upstate
N.D.
N.D.
N.D.
N.D.
+0.2
plant
Norland
N.D.
N.D.
N.D.
N.D.
+0.2
carbon source
M9+glycerol
N.D.
N.D.
N.D.
N.D.
+0.2
plant
Norland
N.D.
N.D.
N.D.
N.D.
+0.2
plant
Norland
N.D.
N.D.
N.D.
N.D.
+0.2
plant
Stem-Atlantic
N.D.
N.D.
N.D.
N.D.
+0.2
plant
Norland
N.D.
N.D.
N.D.
N.D.
+0.2
carbon source
M9+glycerol
N.D.
N.D.
N.D.
N.D.
+0.2
carbon source
M9+polygalacturonate
N.D.
N.D.
N.D.
N.D.
+0.2
plant
Atlantic
N.D.
N.D.
N.D.
N.D.
+0.2
plant
Atlantic
N.D.
N.D.
N.D.
N.D.
+0.3
plant
Upstate
N.D.
N.D.
N.D.
N.D.
+0.3
plant
Upstate
N.D.
N.D.
N.D.
N.D.
+0.3
stress
1.88mM_PTB
N.D.
N.D.
N.D.
N.D.
+0.3
plant
Upstate
N.D.
N.D.
N.D.
N.D.
+0.4
stress
3.75mM_PTB
N.D.
N.D.
N.D.
N.D.
+0.5
stress
1.88mM_PTB
N.D.
N.D.
N.D.
N.D.
+0.5
stress
3.75mM_PTB
N.D.
N.D.
N.D.
N.D.
+0.6
stress
3.75mM_PTB
N.D.
N.D.
N.D.
N.D.
+0.6
stress
1.88mM_PTB
N.D.
N.D.
N.D.
N.D.
+0.7
control
LB
N.D.
N.D.
N.D.
N.D.
+0.7
stress
3.75mM_PTB
N.D.
N.D.
N.D.
N.D.
+0.7
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