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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS06085 and DZA65_RS06095 are separated by 693 nucleotides
DZA65_RS06095 and DZA65_RS06100 are separated by 53 nucleotides
DZA65_RS06100 and DZA65_RS06105 are separated by 508 nucleotides
DZA65_RS06105 and DZA65_RS06110 are separated by 15 nucleotides
DZA65_RS06085: DZA65_RS06085 - MGMT family protein, at 1,257,919 to 1,258,248
_RS06085
DZA65_RS06095: DZA65_RS06095 - hemolysin expression modulator Hha, at 1,258,942 to 1,259,145
_RS06095
DZA65_RS06100: DZA65_RS06100 - Hha toxicity modulator TomB, at 1,259,199 to 1,259,567
_RS06100
DZA65_RS06105: DZA65_RS06105 - 50S ribosomal protein L36, at 1,260,076 to 1,260,219
_RS06105
DZA65_RS06110: DZA65_RS06110 - type B 50S ribosomal protein L31, at 1,260,235 to 1,260,486
_RS06110
Group
Condition
DZA65
_RS06085
DZA65
_RS06095
DZA65
_RS06100
DZA65
_RS06105
DZA65
_RS06110
plant
Stem-Upstate
-0.6
N.D.
-0.6
-0.2
-0.1
control
LB
-0.2
N.D.
+0.1
-0.8
-0.3
plant
Stem-Upstate
-0.5
N.D.
-0.5
+0.0
-0.1
plant
Stem-Upstate
+0.6
N.D.
-0.2
-1.1
-0.1
plant
Stem-Norland
+1.0
N.D.
-0.5
-0.9
-0.1
stress
1.88mM_PTB
-0.2
N.D.
+0.2
-0.1
-0.4
plant
Stem-Atlantic
-0.3
N.D.
-0.4
+0.3
-0.1
control
LB
+0.2
N.D.
+0.1
-0.4
-0.3
plant
Norland
+0.3
N.D.
-0.3
-0.3
-0.3
plant
Stem-Norland
-0.4
N.D.
-0.5
+0.6
+0.2
plant
Stem-Upstate
+0.2
N.D.
-0.6
+0.2
+0.1
plant
Upstate
+0.3
N.D.
-0.5
+0.1
+0.1
plant
Atlantic
+0.4
N.D.
-0.9
+0.4
+0.1
plant
Stem-Atlantic
-0.1
N.D.
-0.6
+0.5
+0.1
stress
3.75mM_PTB
-0.3
N.D.
+0.2
+0.5
-0.4
plant
Stem-Norland
+0.5
N.D.
-0.1
+0.1
-0.3
plant
Stem-Norland
+0.4
N.D.
-1.0
+0.6
+0.3
plant
Stem-Norland
+0.0
N.D.
-0.8
+0.5
+0.5
carbon source
M9+glycerol
-0.2
N.D.
+0.4
+0.2
+0.0
stress
1.88mM_PTB
-0.4
N.D.
+0.6
+0.2
+0.0
plant
Stem-Atlantic
+0.4
N.D.
-0.2
+0.4
-0.2
plant
Stem-Atlantic
+0.4
N.D.
-0.2
+0.4
-0.0
plant
Stem-Upstate
+0.0
N.D.
-0.6
+0.8
+0.3
carbon source
M9+polygalacturonate
+0.3
N.D.
-0.2
+0.2
+0.3
plant
Stem-Atlantic
+0.4
N.D.
-0.2
+0.4
+0.1
carbon source
M9+sucrose
+0.5
N.D.
-0.2
+0.1
+0.3
plant
Norland
+0.6
N.D.
+0.2
+0.0
-0.1
carbon source
M9+glycerol
+0.3
N.D.
+0.6
+0.2
-0.0
plant
Stem-Atlantic
+0.1
N.D.
-0.0
+0.8
+0.2
plant
Stem-Upstate
+0.4
N.D.
-0.5
+1.0
+0.2
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