Fitness for 5 genes in Dickeya dianthicola ME23

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500 ntDZA65_RS05890 and DZA65_RS05895 are separated by 120 nucleotidesDZA65_RS05895 and DZA65_RS05900 are separated by 22 nucleotidesDZA65_RS05900 and DZA65_RS05905 are separated by 60 nucleotidesDZA65_RS05905 and DZA65_RS05910 overlap by 20 nucleotides DZA65_RS05890: DZA65_RS05890 - bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD, at 1,215,676 to 1,216,788 _RS05890 DZA65_RS05895: DZA65_RS05895 - 6,7-dimethyl-8-ribityllumazine synthase, at 1,216,909 to 1,217,382 _RS05895 DZA65_RS05900: DZA65_RS05900 - transcription antitermination factor NusB, at 1,217,405 to 1,217,824 _RS05900 DZA65_RS05905: DZA65_RS05905 - thiamine-phosphate kinase, at 1,217,885 to 1,218,859 _RS05905 DZA65_RS05910: DZA65_RS05910 - phosphatidylglycerophosphatase A, at 1,218,840 to 1,219,352 _RS05910
Group Condition DZA65_RS05890 DZA65_RS05895 DZA65_RS05900 DZA65_RS05905 DZA65_RS05910
plant Upstate N.D. N.D. -1.5 N.D. N.D.
plant Stem-Upstate N.D. N.D. -1.1 N.D. N.D.
control PDB N.D. N.D. -1.0 N.D. N.D.
carbon source M9+polygalacturonate N.D. N.D. -0.9 N.D. N.D.
plant Stem-Upstate N.D. N.D. -0.7 N.D. N.D.
control PDB N.D. N.D. -0.7 N.D. N.D.
plant Norland N.D. N.D. -0.7 N.D. N.D.
plant Upstate N.D. N.D. -0.5 N.D. N.D.
plant Norland N.D. N.D. -0.5 N.D. N.D.
carbon source M9+glycerol N.D. N.D. -0.5 N.D. N.D.
plant Stem-Norland N.D. N.D. -0.5 N.D. N.D.
control PDB N.D. N.D. -0.5 N.D. N.D.
plant Stem-Norland N.D. N.D. -0.5 N.D. N.D.
stress 1.88mM_PTB N.D. N.D. -0.5 N.D. N.D.
carbon source M9+glycerol N.D. N.D. -0.4 N.D. N.D.
carbon source M9+glycerol N.D. N.D. -0.4 N.D. N.D.
control LB N.D. N.D. -0.4 N.D. N.D.
stress 3.75mM_PTB N.D. N.D. +0.4 N.D. N.D.
plant Norland N.D. N.D. +0.4 N.D. N.D.
stress 3.75mM_PTB N.D. N.D. +0.4 N.D. N.D.
control LB N.D. N.D. +0.4 N.D. N.D.
plant Stem-Upstate N.D. N.D. +0.5 N.D. N.D.
plant Stem-Atlantic N.D. N.D. +0.5 N.D. N.D.
plant Atlantic N.D. N.D. +0.5 N.D. N.D.
plant Upstate N.D. N.D. +0.6 N.D. N.D.
plant Stem-Upstate N.D. N.D. +0.6 N.D. N.D.
plant Upstate N.D. N.D. +0.6 N.D. N.D.
plant Stem-Upstate N.D. N.D. +0.8 N.D. N.D.
plant Stem-Atlantic N.D. N.D. +0.9 N.D. N.D.
plant Norland N.D. N.D. +1.0 N.D. N.D.
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