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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS05485 and DZA65_RS05490 are separated by 21 nucleotides
DZA65_RS05490 and DZA65_RS05495 are separated by 34 nucleotides
DZA65_RS05495 and DZA65_RS05500 are separated by 138 nucleotides
DZA65_RS05500 and DZA65_RS05505 are separated by 3 nucleotides
DZA65_RS05485: DZA65_RS05485 - phosphatidate cytidylyltransferase, at 1,127,955 to 1,128,812
_RS05485
DZA65_RS05490: DZA65_RS05490 - sigma E protease regulator RseP, at 1,128,834 to 1,130,189
_RS05490
DZA65_RS05495: DZA65_RS05495 - outer membrane protein assembly factor BamA, at 1,130,224 to 1,132,641
_RS05495
DZA65_RS05500: DZA65_RS05500 - molecular chaperone Skp, at 1,132,780 to 1,133,277
_RS05500
DZA65_RS05505: DZA65_RS05505 - UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase, at 1,133,281 to 1,134,303
_RS05505
Group
Condition
DZA65
_RS05485
DZA65
_RS05490
DZA65
_RS05495
DZA65
_RS05500
DZA65
_RS05505
plant
Stem-Upstate
N.D.
-1.5
N.D.
-2.0
N.D.
plant
Stem-Norland
N.D.
-1.4
N.D.
-2.0
N.D.
plant
Stem-Upstate
N.D.
-1.8
N.D.
-1.1
N.D.
stress
1.88mM_PTB
N.D.
-0.3
N.D.
-2.6
N.D.
plant
Norland
N.D.
-0.6
N.D.
-2.1
N.D.
plant
Stem-Norland
N.D.
-0.8
N.D.
-1.7
N.D.
control
LB
N.D.
-0.2
N.D.
-2.3
N.D.
plant
Upstate
N.D.
-0.8
N.D.
-1.6
N.D.
plant
Atlantic
N.D.
-0.4
N.D.
-2.1
N.D.
plant
Stem-Atlantic
N.D.
-0.6
N.D.
-1.7
N.D.
stress
3.75mM_PTB
N.D.
-0.5
N.D.
-1.9
N.D.
plant
Stem-Upstate
N.D.
-0.6
N.D.
-1.7
N.D.
plant
Norland
N.D.
-0.4
N.D.
-1.9
N.D.
plant
Stem-Atlantic
N.D.
-0.5
N.D.
-1.9
N.D.
plant
Stem-Norland
N.D.
-1.2
N.D.
-1.2
N.D.
plant
Stem-Norland
N.D.
-1.1
N.D.
-1.1
N.D.
plant
Stem-Atlantic
N.D.
-1.2
N.D.
-1.0
N.D.
plant
Stem-Upstate
N.D.
-1.4
N.D.
-0.8
N.D.
plant
Stem-Atlantic
N.D.
-1.0
N.D.
-1.2
N.D.
plant
Norland
N.D.
-0.6
N.D.
-1.6
N.D.
stress
3.75mM_PTB
N.D.
-0.4
N.D.
-1.6
N.D.
plant
Atlantic
N.D.
-0.6
N.D.
-1.5
N.D.
stress
1.88mM_PTB
N.D.
-0.2
N.D.
-1.8
N.D.
plant
Stem-Norland
N.D.
-0.8
N.D.
-1.2
N.D.
plant
Upstate
N.D.
-0.7
N.D.
-1.3
N.D.
stress
3.75mM_PTB
N.D.
-0.5
N.D.
-1.4
N.D.
plant
Stem-Norland
N.D.
-1.0
N.D.
-0.9
N.D.
carbon source
M9+glycerol
N.D.
-0.9
N.D.
+1.5
N.D.
carbon source
M9+glycerol
N.D.
-0.4
N.D.
+1.7
N.D.
carbon source
M9+glycerol
N.D.
+0.0
N.D.
+2.3
N.D.
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