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Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS05475 and DZA65_RS05480 are separated by 183 nucleotides
DZA65_RS05480 and DZA65_RS05485 are separated by 9 nucleotides
DZA65_RS05485 and DZA65_RS05490 are separated by 21 nucleotides
DZA65_RS05490 and DZA65_RS05495 are separated by 34 nucleotides
DZA65_RS05475: DZA65_RS05475 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase, at 1,125,807 to 1,127,000
_RS05475
DZA65_RS05480: DZA65_RS05480 - (2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase, at 1,127,184 to 1,127,945
_RS05480
DZA65_RS05485: DZA65_RS05485 - phosphatidate cytidylyltransferase, at 1,127,955 to 1,128,812
_RS05485
DZA65_RS05490: DZA65_RS05490 - sigma E protease regulator RseP, at 1,128,834 to 1,130,189
_RS05490
DZA65_RS05495: DZA65_RS05495 - outer membrane protein assembly factor BamA, at 1,130,224 to 1,132,641
_RS05495
Group
Condition
DZA65
_RS05475
DZA65
_RS05480
DZA65
_RS05485
DZA65
_RS05490
DZA65
_RS05495
plant
Stem-Upstate
N.D.
N.D.
N.D.
-1.8
N.D.
plant
Stem-Upstate
N.D.
N.D.
N.D.
-1.5
N.D.
plant
Stem-Upstate
N.D.
N.D.
N.D.
-1.4
N.D.
plant
Stem-Norland
N.D.
N.D.
N.D.
-1.4
N.D.
carbon source
M9+glycerol
N.D.
N.D.
N.D.
-1.3
N.D.
carbon source
M9+glycerol
N.D.
N.D.
N.D.
-1.2
N.D.
plant
Stem-Atlantic
N.D.
N.D.
N.D.
-1.2
N.D.
plant
Stem-Norland
N.D.
N.D.
N.D.
-1.2
N.D.
control
PDB
N.D.
N.D.
N.D.
-1.1
N.D.
plant
Stem-Norland
N.D.
N.D.
N.D.
-1.1
N.D.
carbon source
M9+glycerol
N.D.
N.D.
N.D.
-1.0
N.D.
plant
Stem-Atlantic
N.D.
N.D.
N.D.
-1.0
N.D.
plant
Stem-Norland
N.D.
N.D.
N.D.
-1.0
N.D.
control
PDB
N.D.
N.D.
N.D.
-1.0
N.D.
carbon source
M9+glycerol
N.D.
N.D.
N.D.
-0.9
N.D.
control
PDB
N.D.
N.D.
N.D.
-0.8
N.D.
plant
Upstate
N.D.
N.D.
N.D.
-0.8
N.D.
plant
Upstate
N.D.
N.D.
N.D.
-0.8
N.D.
plant
Stem-Atlantic
N.D.
N.D.
N.D.
-0.8
N.D.
plant
Stem-Norland
N.D.
N.D.
N.D.
-0.8
N.D.
plant
Stem-Norland
N.D.
N.D.
N.D.
-0.8
N.D.
plant
Stem-Atlantic
N.D.
N.D.
N.D.
-0.7
N.D.
plant
Upstate
N.D.
N.D.
N.D.
-0.7
N.D.
plant
Stem-Upstate
N.D.
N.D.
N.D.
-0.7
N.D.
plant
Stem-Atlantic
N.D.
N.D.
N.D.
-0.6
N.D.
plant
Stem-Upstate
N.D.
N.D.
N.D.
-0.6
N.D.
plant
Norland
N.D.
N.D.
N.D.
-0.6
N.D.
plant
Atlantic
N.D.
N.D.
N.D.
-0.6
N.D.
plant
Norland
N.D.
N.D.
N.D.
-0.6
N.D.
plant
Stem-Atlantic
N.D.
N.D.
N.D.
-0.6
N.D.
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