Fitness for 5 genes in Dickeya dianthicola ME23

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Top 30 experiments (either direction), sorted by average fitness

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500 ntDZA65_RS04950 and DZA65_RS04955 are separated by 18 nucleotidesDZA65_RS04955 and DZA65_RS04960 overlap by 4 nucleotidesDZA65_RS04960 and DZA65_RS04965 are separated by 396 nucleotidesDZA65_RS04965 and DZA65_RS04970 are separated by 4 nucleotides DZA65_RS04950: DZA65_RS04950 - shufflon system plasmid conjugative transfer pilus tip adhesin PilV, at 1,024,978 to 1,026,207 _RS04950 DZA65_RS04955: DZA65_RS04955 - cysteinyl-tRNA synthetase, at 1,026,226 to 1,026,735 _RS04955 DZA65_RS04960: DZA65_RS04960 - AAA family ATPase, at 1,026,732 to 1,027,760 _RS04960 DZA65_RS04965: DZA65_RS04965 - hypothetical protein, at 1,028,157 to 1,029,065 _RS04965 DZA65_RS04970: DZA65_RS04970 - TIGR03759 family integrating conjugative element protein, at 1,029,070 to 1,029,804 _RS04970
Group Condition DZA65_RS04950 DZA65_RS04955 DZA65_RS04960 DZA65_RS04965 DZA65_RS04970
plant Stem-Norland +0.1 -0.3 N.D. -0.4 -0.7
plant Stem-Upstate +0.2 -0.4 N.D. -0.4 -0.1
carbon source M9+glycerol +0.1 -0.3 N.D. -0.1 -0.3
carbon source M9+glycerol -0.1 -0.1 N.D. -0.2 -0.3
plant Upstate -0.2 -0.2 N.D. -0.1 -0.1
plant Stem-Norland +0.2 -0.5 N.D. +0.0 -0.2
plant Stem-Upstate +0.3 -0.6 N.D. -0.1 -0.1
plant Atlantic +0.0 -0.4 N.D. -0.3 +0.3
plant Stem-Atlantic +0.1 -0.2 N.D. -0.1 -0.3
plant Stem-Norland +0.1 -0.6 N.D. +0.3 -0.2
plant Stem-Norland +0.0 -0.4 N.D. -0.2 +0.2
plant Stem-Norland +0.1 -0.3 N.D. -0.3 +0.3
control PDB -0.1 -0.2 N.D. -0.1 +0.2
plant Norland -0.1 -0.1 N.D. -0.2 +0.3
plant Stem-Atlantic +0.1 -0.2 N.D. -0.2 +0.2
plant Upstate +0.1 -0.1 N.D. -0.3 +0.1
plant Atlantic -0.1 -0.4 N.D. +0.0 +0.4
carbon source M9+polygalacturonate -0.1 -0.3 N.D. +0.2 +0.0
plant Stem-Upstate +0.2 -0.3 N.D. -0.1 +0.1
control PDB -0.1 -0.2 N.D. -0.0 +0.3
carbon source M9+sucrose +0.1 -0.1 N.D. +0.2 -0.2
plant Norland -0.1 -0.2 N.D. +0.1 +0.3
plant Stem-Atlantic +0.2 +0.1 N.D. -0.3 +0.2
stress 3.75mM_PTB +0.1 +0.3 N.D. +0.1 -0.1
plant Stem-Norland +0.2 +0.3 N.D. -0.3 +0.2
plant Stem-Upstate +0.2 +0.0 N.D. +0.3 +0.1
stress 1.88mM_PTB +0.2 +0.0 N.D. +0.3 +0.2
stress 1.88mM_PTB +0.1 +0.1 N.D. +0.3 +0.2
stress 1.88mM_PTB +0.2 +0.1 N.D. +0.2 +0.3
plant Stem-Upstate +0.1 +0.5 N.D. +0.3 +0.4
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