Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 77 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
DZA65_RS04855 and DZA65_RS04860 are separated by 741 nucleotides
DZA65_RS04860 and DZA65_RS04865 overlap by 4 nucleotides
DZA65_RS04865 and DZA65_RS04870 are separated by 697 nucleotides
DZA65_RS04870 and DZA65_RS04875 are separated by 79 nucleotides
DZA65_RS04855: DZA65_RS04855 - helix-turn-helix domain-containing protein, at 1,004,677 to 1,005,924
_RS04855
DZA65_RS04860: DZA65_RS04860 - TIGR03761 family integrating conjugative element protein, at 1,006,666 to 1,007,442
_RS04860
DZA65_RS04865: DZA65_RS04865 - DNA topoisomerase III, at 1,007,439 to 1,009,463
_RS04865
DZA65_RS04870: DZA65_RS04870 - DUF3577 domain-containing protein, at 1,010,161 to 1,010,640
_RS04870
DZA65_RS04875: DZA65_RS04875 - hypothetical protein, at 1,010,720 to 1,010,947
_RS04875
Group
Condition
DZA65
_RS04855
DZA65
_RS04860
DZA65
_RS04865
DZA65
_RS04870
DZA65
_RS04875
plant
Stem-Upstate
-0.1
+0.1
+0.2
-0.5
-0.6
plant
Stem-Upstate
+0.2
+0.1
+0.0
-0.7
-0.6
control
LB
-0.2
-0.0
-0.0
+0.2
-0.4
carbon source
M9+glycerol
-0.1
-0.1
-0.0
+0.2
-0.3
plant
Stem-Norland
+0.2
+0.1
+0.2
-0.1
-0.4
plant
Stem-Upstate
+0.0
+0.2
+0.1
-0.4
+0.1
carbon source
M9+glycerol
-0.0
-0.1
+0.1
+0.2
-0.2
plant
Atlantic
-0.2
+0.0
-0.1
-0.1
+0.4
plant
Stem-Atlantic
+0.0
-0.0
-0.1
-0.2
+0.5
plant
Stem-Upstate
+0.1
-0.0
+0.0
-0.2
+0.4
control
PDB
-0.1
-0.0
-0.1
+0.1
+0.5
plant
Stem-Upstate
-0.2
+0.2
+0.0
+0.3
+0.1
plant
Stem-Norland
+0.1
-0.1
+0.0
-0.2
+0.6
plant
Stem-Norland
-0.1
+0.0
+0.1
+0.2
+0.3
plant
Atlantic
-0.1
+0.0
-0.1
+0.0
+0.6
plant
Stem-Atlantic
-0.1
+0.1
+0.2
+0.1
+0.2
control
PDB
-0.0
+0.1
-0.1
-0.0
+0.6
control
PDB
-0.1
+0.0
-0.0
+0.1
+0.5
plant
Stem-Norland
-0.0
+0.1
+0.1
-0.1
+0.6
plant
Upstate
-0.0
+0.1
+0.1
-0.0
+0.4
plant
Norland
+0.1
-0.1
+0.0
+0.1
+0.5
plant
Norland
+0.0
+0.1
+0.2
-0.1
+0.5
carbon source
M9+glycerol
-0.0
+0.1
+0.0
+0.3
+0.3
plant
Upstate
-0.0
+0.0
-0.0
+0.3
+0.4
plant
Upstate
+0.1
+0.1
-0.0
+0.1
+0.4
stress
1.88mM_PTB
+0.2
+0.2
+0.2
-0.2
+0.3
control
LB
-0.0
+0.2
-0.0
+0.0
+0.6
plant
Upstate
-0.0
+0.0
-0.0
+0.2
+0.5
plant
Norland
+0.1
+0.1
-0.1
+0.1
+0.8
plant
Stem-Norland
+0.0
+0.1
+0.2
+0.6
+0.2
remove
DZA65_RS04855
plot
remove
DZA65_RS04860
plot
remove
DZA65_RS04865
remove
DZA65_RS04870
plot
remove
DZA65_RS04875
plot