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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS04170 and DZA65_RS04175 are separated by 8 nucleotides
DZA65_RS04175 and DZA65_RS04180 overlap by 1 nucleotides
DZA65_RS04180 and DZA65_RS04185 overlap by 4 nucleotides
DZA65_RS04185 and DZA65_RS04190 overlap by 29 nucleotides
DZA65_RS04170: DZA65_RS04170 - hypothetical protein, at 874,057 to 874,689
_RS04170
DZA65_RS04175: DZA65_RS04175 - tail protein, at 874,698 to 876,119
_RS04175
DZA65_RS04180: DZA65_RS04180 - tail fiber assembly protein, at 876,119 to 876,739
_RS04180
DZA65_RS04185: DZA65_RS04185 - hypothetical protein, at 876,736 to 877,461
_RS04185
DZA65_RS04190: DZA65_RS04190 - hypothetical protein, at 877,433 to 877,960
_RS04190
Group
Condition
DZA65
_RS04170
DZA65
_RS04175
DZA65
_RS04180
DZA65
_RS04185
DZA65
_RS04190
plant
Stem-Norland
-0.4
-0.1
-0.3
-0.4
-0.2
plant
Stem-Upstate
-0.1
-0.2
+0.1
-0.4
-0.5
plant
Stem-Upstate
+0.1
-0.0
+0.2
-0.6
-0.7
plant
Stem-Upstate
-0.4
+0.0
-0.1
-0.3
-0.2
plant
Stem-Norland
-0.4
-0.1
+0.0
-0.1
-0.4
plant
Stem-Atlantic
-0.2
-0.1
-0.2
+0.0
-0.4
plant
Stem-Atlantic
-0.2
-0.0
-0.1
-0.0
-0.5
plant
Upstate
-0.2
-0.0
-0.2
-0.2
-0.2
plant
Upstate
-0.2
+0.0
-0.1
-0.2
-0.3
plant
Stem-Norland
-0.2
-0.2
-0.2
+0.1
-0.2
plant
Stem-Atlantic
-0.1
-0.0
-0.1
-0.0
-0.3
plant
Stem-Atlantic
-0.4
-0.1
-0.1
+0.2
-0.1
plant
Stem-Upstate
+0.3
-0.1
-0.1
-0.0
-0.6
carbon source
M9+polygalacturonate
-0.0
-0.1
+0.1
-0.2
-0.2
plant
Stem-Atlantic
-0.3
+0.1
-0.2
+0.2
-0.3
plant
Norland
-0.1
-0.1
+0.1
-0.1
-0.2
plant
Atlantic
-0.3
-0.0
-0.1
+0.2
-0.1
plant
Atlantic
-0.2
+0.1
+0.1
-0.1
-0.1
plant
Stem-Norland
-0.1
-0.0
-0.1
+0.1
-0.3
plant
Stem-Atlantic
-0.1
-0.1
+0.2
-0.1
-0.1
plant
Stem-Upstate
+0.3
-0.1
-0.2
+0.0
+0.0
plant
Stem-Norland
+0.1
-0.2
-0.2
+0.0
+0.4
stress
3.75mM_PTB
-0.0
-0.1
+0.0
-0.1
+0.4
control
PDB
+0.0
+0.0
-0.0
-0.3
+0.4
stress
1.88mM_PTB
-0.1
-0.1
+0.2
-0.1
+0.2
stress
3.75mM_PTB
+0.0
-0.0
-0.0
-0.1
+0.4
control
LB
-0.1
+0.0
-0.1
+0.2
+0.2
carbon source
M9+sucrose
+0.1
+0.0
+0.0
-0.1
+0.4
stress
3.75mM_PTB
+0.1
+0.1
+0.1
+0.0
+0.3
plant
Stem-Upstate
+0.1
+0.2
+0.4
-0.3
+0.3
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DZA65_RS04180
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