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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS03670 and DZA65_RS03675 are separated by 806 nucleotides
DZA65_RS03675 and DZA65_RS03680 are separated by 210 nucleotides
DZA65_RS03680 and DZA65_RS03685 are separated by 48 nucleotides
DZA65_RS03685 and DZA65_RS03690 overlap by 4 nucleotides
DZA65_RS03670: DZA65_RS03670 - kdo(2)-lipid IV(A) palmitoleoyltransferase, at 772,225 to 773,145
_RS03670
DZA65_RS03675: DZA65_RS03675 - NCS2 family permease, at 773,952 to 775,319
_RS03675
DZA65_RS03680: DZA65_RS03680 - Na+/H+ antiporter, at 775,530 to 777,176
_RS03680
DZA65_RS03685: DZA65_RS03685 - cation/acetate symporter ActP, at 777,225 to 778,883
_RS03685
DZA65_RS03690: DZA65_RS03690 - DUF485 domain-containing protein, at 778,880 to 779,191
_RS03690
Group
Condition
DZA65
_RS03670
DZA65
_RS03675
DZA65
_RS03680
DZA65
_RS03685
DZA65
_RS03690
plant
Stem-Norland
-2.3
-0.1
-0.0
-0.0
-0.3
plant
Upstate
-2.0
-0.0
-0.2
-0.1
+0.1
plant
Stem-Atlantic
-1.9
+0.0
+0.0
-0.0
-0.3
plant
Stem-Upstate
-2.0
-0.2
+0.0
-0.1
+0.1
plant
Stem-Atlantic
-1.8
+0.0
-0.2
-0.0
+0.0
plant
Stem-Norland
-1.6
+0.2
-0.2
-0.1
-0.1
plant
Atlantic
-1.4
-0.1
+0.1
-0.2
-0.1
plant
Upstate
-1.6
-0.1
-0.1
-0.0
-0.0
plant
Stem-Atlantic
-2.2
+0.0
+0.1
+0.1
+0.3
plant
Stem-Atlantic
-1.8
-0.1
+0.1
+0.1
+0.0
plant
Upstate
-1.5
+0.0
-0.1
+0.0
-0.2
plant
Stem-Norland
-1.6
-0.1
+0.1
-0.0
+0.0
plant
Norland
-1.5
-0.0
+0.0
+0.2
-0.2
plant
Stem-Upstate
-1.4
-0.2
+0.1
-0.1
+0.1
plant
Stem-Upstate
-1.5
-0.0
+0.2
+0.0
-0.2
plant
Upstate
-1.2
+0.2
-0.4
-0.1
+0.1
plant
Stem-Atlantic
-1.6
+0.2
+0.1
+0.0
-0.1
plant
Atlantic
-1.7
+0.1
+0.1
-0.1
+0.1
plant
Atlantic
-1.5
+0.0
+0.0
-0.1
+0.1
control
LB
-1.3
+0.2
-0.1
-0.0
-0.2
plant
Upstate
-1.3
+0.2
-0.1
+0.1
-0.2
plant
Atlantic
-1.6
+0.1
+0.0
-0.0
+0.1
plant
Stem-Norland
-1.2
-0.1
+0.2
+0.1
-0.1
plant
Stem-Norland
-1.1
-0.1
-0.2
+0.2
+0.1
plant
Stem-Norland
-1.6
+0.1
+0.1
+0.0
+0.4
plant
Stem-Atlantic
-1.3
+0.2
+0.2
+0.0
-0.0
plant
Norland
-1.4
+0.1
+0.1
+0.0
+0.2
plant
Atlantic
-1.3
+0.1
+0.1
-0.0
+0.2
plant
Atlantic
-1.3
-0.0
+0.4
+0.0
+0.1
plant
Stem-Upstate
-1.1
-0.1
+0.3
+0.1
+0.3
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