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Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS03485 and DZA65_RS03490 are separated by 89 nucleotides
DZA65_RS03490 and DZA65_RS03495 are separated by 23 nucleotides
DZA65_RS03495 and DZA65_RS03500 are separated by 166 nucleotides
DZA65_RS03500 and DZA65_RS03505 are separated by 9 nucleotides
DZA65_RS03485: DZA65_RS03485 - site-specific tyrosine recombinase XerD, at 736,007 to 736,906
_RS03485
DZA65_RS03490: DZA65_RS03490 - bifunctional protein-disulfide isomerase/oxidoreductase DsbC, at 736,996 to 737,712
_RS03490
DZA65_RS03495: DZA65_RS03495 - single-stranded-DNA-specific exonuclease RecJ, at 737,736 to 739,466
_RS03495
DZA65_RS03500: DZA65_RS03500 - peptide chain release factor 2, at 739,633 to 740,731
_RS03500
DZA65_RS03505: DZA65_RS03505 - lysine--tRNA ligase, at 740,741 to 742,258
_RS03505
Group
Condition
DZA65
_RS03485
DZA65
_RS03490
DZA65
_RS03495
DZA65
_RS03500
DZA65
_RS03505
plant
Stem-Norland
N.D.
-0.5
-0.8
N.D.
N.D.
plant
Stem-Upstate
N.D.
-0.1
-1.1
N.D.
N.D.
plant
Atlantic
N.D.
-0.3
-0.8
N.D.
N.D.
stress
1.88mM_PTB
N.D.
-0.6
-0.5
N.D.
N.D.
plant
Stem-Upstate
N.D.
-0.3
-0.8
N.D.
N.D.
plant
Stem-Norland
N.D.
-0.0
-1.0
N.D.
N.D.
plant
Stem-Upstate
N.D.
+0.0
-0.9
N.D.
N.D.
control
LB
N.D.
-0.2
-0.7
N.D.
N.D.
stress
1.88mM_PTB
N.D.
-0.6
-0.3
N.D.
N.D.
carbon source
M9+polygalacturonate
N.D.
-0.2
-0.7
N.D.
N.D.
plant
Stem-Atlantic
N.D.
+0.3
-1.0
N.D.
N.D.
plant
Stem-Norland
N.D.
+0.3
-0.9
N.D.
N.D.
plant
Upstate
N.D.
+0.2
-0.8
N.D.
N.D.
plant
Stem-Upstate
N.D.
+0.2
-0.8
N.D.
N.D.
plant
Stem-Norland
N.D.
+0.2
-0.7
N.D.
N.D.
plant
Stem-Atlantic
N.D.
+0.5
-0.9
N.D.
N.D.
plant
Stem-Atlantic
N.D.
+0.4
-0.7
N.D.
N.D.
plant
Stem-Atlantic
N.D.
+0.4
-0.7
N.D.
N.D.
plant
Stem-Atlantic
N.D.
+0.6
-0.8
N.D.
N.D.
plant
Stem-Atlantic
N.D.
+0.7
-0.7
N.D.
N.D.
plant
Upstate
N.D.
+0.5
-0.5
N.D.
N.D.
plant
Stem-Upstate
N.D.
+0.7
-0.7
N.D.
N.D.
plant
Norland
N.D.
+0.6
-0.5
N.D.
N.D.
carbon source
M9+sucrose
N.D.
+0.6
-0.4
N.D.
N.D.
carbon source
M9+sucrose
N.D.
+0.9
-0.4
N.D.
N.D.
carbon source
M9+glycerol
N.D.
+0.8
-0.4
N.D.
N.D.
carbon source
M9+glycerol
N.D.
+1.2
-0.7
N.D.
N.D.
carbon source
M9+glycerol
N.D.
+0.8
-0.2
N.D.
N.D.
carbon source
M9+glycerol
N.D.
+1.1
-0.3
N.D.
N.D.
carbon source
M9+glycerol
N.D.
+1.4
-0.2
N.D.
N.D.
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