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Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS03375 and DZA65_RS03380 overlap by 32 nucleotides
DZA65_RS03380 and DZA65_RS03385 are separated by 153 nucleotides
DZA65_RS03385 and DZA65_RS03390 are separated by 40 nucleotides
DZA65_RS03390 and DZA65_RS03395 are separated by 114 nucleotides
DZA65_RS03375: DZA65_RS03375 - ribosomal protein S18-alanine N-acetyltransferase, at 716,025 to 716,468
_RS03375
DZA65_RS03380: DZA65_RS03380 - DNA polymerase III subunit psi, at 716,437 to 716,856
_RS03380
DZA65_RS03385: DZA65_RS03385 - 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC, at 717,010 to 718,038
_RS03385
DZA65_RS03390: DZA65_RS03390 - aldo/keto reductase, at 718,079 to 719,074
_RS03390
DZA65_RS03395: DZA65_RS03395 - LysR family transcriptional regulator, at 719,189 to 720,091
_RS03395
Group
Condition
DZA65
_RS03375
DZA65
_RS03380
DZA65
_RS03385
DZA65
_RS03390
DZA65
_RS03395
plant
Stem-Atlantic
-0.6
N.D.
-0.6
+0.3
+0.2
plant
Stem-Norland
-0.2
N.D.
-0.6
+0.0
+0.1
plant
Stem-Norland
-0.1
N.D.
-0.3
-0.0
-0.1
plant
Stem-Norland
-0.3
N.D.
+0.1
-0.6
+0.2
plant
Stem-Norland
-0.4
N.D.
-0.2
+0.2
-0.2
plant
Stem-Upstate
+0.2
N.D.
-0.4
-0.1
-0.2
plant
Stem-Atlantic
-0.3
N.D.
-0.2
-0.1
+0.1
plant
Stem-Norland
-0.2
N.D.
-0.2
+0.2
-0.1
plant
Stem-Upstate
-0.7
N.D.
-0.0
+0.0
+0.5
plant
Stem-Upstate
-0.4
N.D.
+0.1
+0.1
+0.1
carbon source
M9+starch
+0.1
N.D.
+0.1
-0.2
-0.1
carbon source
M9+glycerol
+0.2
N.D.
-0.2
-0.1
+0.1
carbon source
M9+glycerol
+0.3
N.D.
-0.2
-0.1
-0.1
control
PDB
-0.2
N.D.
+0.2
-0.0
+0.0
plant
Stem-Upstate
+0.2
N.D.
-0.1
-0.4
+0.3
carbon source
M9+sucrose
+0.1
N.D.
+0.2
-0.2
-0.0
plant
Norland
+0.2
N.D.
+0.1
-0.2
-0.0
plant
Stem-Norland
+0.0
N.D.
+0.1
+0.2
-0.2
control
PDB
-0.2
N.D.
+0.3
-0.0
+0.0
control
PDB
-0.3
N.D.
+0.3
+0.2
-0.0
control
LB
+0.1
N.D.
-0.2
+0.1
+0.2
control
LB
+0.3
N.D.
-0.1
+0.1
-0.1
plant
Norland
+0.1
N.D.
+0.2
-0.1
+0.1
carbon source
M9+glycerol
+0.4
N.D.
-0.1
-0.0
+0.1
plant
Stem-Norland
-0.2
N.D.
+0.3
-0.1
+0.3
control
LB
+0.3
N.D.
-0.1
-0.0
+0.2
carbon source
M9+polygalacturonate
+0.1
N.D.
+0.4
-0.2
+0.2
plant
Upstate
+0.2
N.D.
+0.3
+0.1
+0.1
plant
Stem-Upstate
-0.1
N.D.
+0.0
+0.4
+0.5
plant
Stem-Upstate
+0.1
N.D.
+0.1
+0.5
+0.1
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