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Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS03325 and DZA65_RS03330 are separated by 1 nucleotides
DZA65_RS03330 and DZA65_RS03335 overlap by 1 nucleotides
DZA65_RS03335 and DZA65_RS03340 are separated by 2 nucleotides
DZA65_RS03340 and DZA65_RS03345 are separated by 11 nucleotides
DZA65_RS03325: DZA65_RS03325 - ATP-grasp domain-containing protein, at 704,391 to 705,629
_RS03325
DZA65_RS03330: DZA65_RS03330 - EamA family transporter, at 705,631 to 706,563
_RS03330
DZA65_RS03335: DZA65_RS03335 - YggS family pyridoxal phosphate-dependent enzyme, at 706,563 to 707,222
_RS03335
DZA65_RS03340: DZA65_RS03340 - adenine phosphoribosyltransferase, at 707,225 to 707,785
_RS03340
DZA65_RS03345: DZA65_RS03345 - cysteine synthase family protein, at 707,797 to 708,735
_RS03345
Group
Condition
DZA65
_RS03325
DZA65
_RS03330
DZA65
_RS03335
DZA65
_RS03340
DZA65
_RS03345
plant
Stem-Atlantic
-0.2
-1.1
-0.2
-1.5
-0.0
carbon source
M9+polygalacturonate
+0.4
-0.7
-0.8
-1.2
-0.4
plant
Stem-Norland
-0.6
-0.4
-1.0
-0.2
-0.1
plant
Stem-Atlantic
-0.2
-0.8
-0.3
-0.6
-0.2
plant
Atlantic
-0.0
-0.2
-0.9
-0.5
-0.2
carbon source
M9+polygalacturonate
+0.2
-0.7
-0.1
-0.7
-0.3
plant
Stem-Norland
+0.4
-0.3
-0.6
-0.5
-0.5
control
PDB
+0.4
+0.0
-0.6
-0.4
-0.8
control
PDB
+0.2
-0.3
-0.3
-0.7
-0.2
plant
Atlantic
+0.1
-0.5
-0.3
-0.6
-0.1
plant
Stem-Atlantic
+0.0
-0.3
-0.9
-0.2
+0.1
plant
Stem-Atlantic
-0.1
-0.8
-0.1
-0.2
+0.2
carbon source
M9+polygalacturonate
+0.2
-0.7
-0.1
-0.4
+0.2
plant
Upstate
+0.1
-0.5
-0.5
-0.3
+0.3
plant
Stem-Upstate
+0.0
-1.0
+0.6
-0.5
+0.3
control
LB
-0.4
-0.1
+0.1
-0.7
+0.5
plant
Atlantic
+0.5
-0.3
-0.5
-0.3
+0.2
plant
Stem-Upstate
-0.0
-0.9
-0.5
+0.8
+0.3
plant
Stem-Atlantic
-0.2
-0.3
+0.6
-0.2
-0.2
plant
Stem-Upstate
+0.3
-0.2
-0.1
+0.4
-0.7
plant
Stem-Upstate
+0.1
+0.1
+0.5
+0.2
-1.1
plant
Stem-Upstate
-0.1
-0.7
+0.9
+0.5
-0.7
plant
Stem-Upstate
+0.4
-0.3
+0.8
+0.0
-1.0
plant
Stem-Norland
+0.5
-0.6
+0.5
+0.1
-0.4
plant
Stem-Norland
+0.1
-0.2
+0.3
+0.6
-0.3
plant
Norland
-0.1
-0.0
-0.1
-0.2
+1.1
plant
Atlantic
+0.2
+0.1
-0.4
+0.2
+0.7
plant
Stem-Upstate
-0.4
-0.1
+0.7
+0.1
+0.5
carbon source
M9+glycerol
+0.3
+0.6
+0.4
+0.2
-0.2
carbon source
M9+glycerol
-0.1
+0.9
+0.3
+0.1
+0.4
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