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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS02925 and DZA65_RS02930 are separated by 3 nucleotides
DZA65_RS02930 and DZA65_RS02935 are separated by 199 nucleotides
DZA65_RS02935 and DZA65_RS02940 overlap by 1 nucleotides
DZA65_RS02940 and DZA65_RS02945 are separated by 678 nucleotides
DZA65_RS02925: DZA65_RS02925 - membrane protein, at 626,447 to 626,845
_RS02925
DZA65_RS02930: DZA65_RS02930 - DUF883 domain-containing protein, at 626,849 to 627,154
_RS02930
DZA65_RS02935: DZA65_RS02935 - EnvZ/OmpR regulon moderator MzrA, at 627,354 to 627,701
_RS02935
DZA65_RS02940: DZA65_RS02940 - DedA family protein, at 627,701 to 628,378
_RS02940
DZA65_RS02945: DZA65_RS02945 - transcriptional regulator ExuR, at 629,057 to 629,836
_RS02945
Group
Condition
DZA65
_RS02925
DZA65
_RS02930
DZA65
_RS02935
DZA65
_RS02940
DZA65
_RS02945
plant
Stem-Norland
-0.6
-0.7
+0.1
-1.4
-2.2
plant
Stem-Norland
+0.4
+0.3
-0.1
-1.5
-3.9
plant
Stem-Upstate
+0.6
-0.7
-0.5
-1.5
-1.5
plant
Stem-Atlantic
-0.4
-0.5
-0.1
-1.7
-0.6
plant
Stem-Upstate
+0.7
-0.3
-0.2
-1.7
-1.4
plant
Stem-Upstate
-0.0
-0.6
+0.1
-1.4
-0.8
plant
Stem-Upstate
+0.2
+0.3
+0.3
-2.2
-1.3
plant
Stem-Upstate
+0.3
+0.2
-0.0
-2.1
-0.9
plant
Upstate
+0.2
+0.4
+0.1
-1.2
-2.0
plant
Norland
-0.4
-0.1
+0.0
-0.5
-1.2
plant
Stem-Norland
+0.6
-0.5
-0.0
-2.4
+0.2
plant
Stem-Atlantic
-0.1
+0.2
-0.3
-1.4
-0.6
plant
Atlantic
+0.1
+0.3
-0.0
-1.1
-1.4
plant
Stem-Atlantic
-0.0
+0.1
-0.2
-1.1
-0.9
plant
Stem-Norland
-0.0
+0.2
-0.1
-1.7
-0.4
plant
Stem-Norland
-0.9
+0.1
+0.1
-1.0
-0.1
plant
Upstate
-0.0
+0.2
+0.0
-1.1
-0.8
plant
Upstate
-0.1
+0.3
-0.1
-1.0
-0.7
plant
Norland
+0.3
-0.3
+0.2
-0.4
-1.4
plant
Stem-Atlantic
-0.2
+0.2
+0.3
-1.0
-0.9
plant
Stem-Atlantic
-0.4
-0.3
+0.1
-1.1
+0.3
plant
Atlantic
+0.1
+0.3
-0.0
-0.5
-1.2
control
LB
-0.5
+0.1
+0.1
+0.5
-1.5
control
LB
+0.2
-0.2
-0.0
+0.2
-1.5
plant
Stem-Upstate
-0.4
+0.3
+0.1
-0.9
-0.3
stress
1.88mM_PTB
-0.0
+0.3
+0.0
+0.3
-1.8
plant
Atlantic
+0.0
+0.4
+0.1
-0.9
-0.7
plant
Stem-Atlantic
+0.2
+0.5
-0.0
-1.1
-0.4
plant
Norland
+0.1
+0.5
+0.1
-0.6
-1.0
control
PDB
+0.4
+0.2
-0.3
+0.2
-1.3
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