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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS02840 and DZA65_RS02845 are separated by 114 nucleotides
DZA65_RS02845 and DZA65_RS02850 are separated by 175 nucleotides
DZA65_RS02850 and DZA65_RS02855 are separated by 444 nucleotides
DZA65_RS02855 and DZA65_RS02860 are separated by 188 nucleotides
DZA65_RS02840: DZA65_RS02840 - divalent cation tolerance protein CutA, at 609,685 to 610,068
_RS02840
DZA65_RS02845: DZA65_RS02845 - anaerobic C4-dicarboxylate transporter, at 610,183 to 611,484
_RS02845
DZA65_RS02850: DZA65_RS02850 - aspartate ammonia-lyase, at 611,660 to 613,099
_RS02850
DZA65_RS02855: DZA65_RS02855 - FxsA family protein, at 613,544 to 614,047
_RS02855
DZA65_RS02860: DZA65_RS02860 - co-chaperone GroES, at 614,236 to 614,529
_RS02860
Group
Condition
DZA65
_RS02840
DZA65
_RS02845
DZA65
_RS02850
DZA65
_RS02855
DZA65
_RS02860
control
LB
-0.2
+0.0
-0.5
+0.1
N.D.
plant
Stem-Upstate
-0.2
+0.2
-0.0
-0.5
N.D.
plant
Stem-Upstate
-0.1
-0.2
-0.4
+0.2
N.D.
control
LB
+0.2
-0.1
-0.3
-0.1
N.D.
plant
Stem-Atlantic
+0.2
-0.1
-0.1
-0.2
N.D.
control
LB
-0.0
+0.1
-0.4
+0.2
N.D.
control
LB
-0.1
+0.3
-0.6
+0.2
N.D.
plant
Stem-Norland
+0.3
-0.3
+0.0
-0.1
N.D.
stress
3.75mM_PTB
+0.5
-0.1
+0.1
-0.6
N.D.
plant
Stem-Upstate
+0.4
+0.1
-0.3
-0.2
N.D.
plant
Upstate
-0.3
-0.3
+0.1
+0.4
N.D.
plant
Stem-Norland
+0.1
+0.1
-0.4
+0.2
N.D.
stress
3.75mM_PTB
+0.5
-0.2
+0.0
-0.3
N.D.
control
PDB
+0.4
+0.0
+0.1
-0.4
N.D.
stress
3.75mM_PTB
+0.4
-0.1
+0.1
-0.2
N.D.
plant
Stem-Atlantic
+0.4
-0.2
+0.1
-0.0
N.D.
plant
Atlantic
-0.2
+0.1
+0.2
+0.2
N.D.
control
PDB
+0.5
+0.0
+0.2
-0.4
N.D.
plant
Upstate
+0.2
+0.2
+0.1
-0.2
N.D.
carbon source
M9+glycerol
+0.5
-0.1
-0.1
+0.1
N.D.
stress
3.75mM_PTB
+0.7
-0.2
+0.3
-0.4
N.D.
control
PDB
+0.4
+0.1
+0.2
-0.3
N.D.
carbon source
M9+glycerol
+0.5
-0.0
+0.1
-0.1
N.D.
plant
Norland
+0.4
-0.1
+0.2
+0.1
N.D.
carbon source
M9+glycerol
+0.5
+0.3
-0.1
-0.1
N.D.
carbon source
M9+glycerol
+0.6
-0.0
+0.1
+0.1
N.D.
plant
Upstate
+0.3
+0.1
+0.1
+0.3
N.D.
plant
Norland
+0.2
+0.3
-0.0
+0.3
N.D.
plant
Norland
+0.4
+0.0
+0.3
+0.1
N.D.
carbon source
M9+glycerol
+0.5
+0.2
+0.1
+0.1
N.D.
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