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Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS02660 and DZA65_RS02665 are separated by 34 nucleotides
DZA65_RS02665 and DZA65_RS02670 are separated by 59 nucleotides
DZA65_RS02670 and DZA65_RS02675 are separated by 302 nucleotides
DZA65_RS02675 and DZA65_RS02680 are separated by 140 nucleotides
DZA65_RS02660: DZA65_RS02660 - sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC, at 570,341 to 571,426
_RS02660
DZA65_RS02665: DZA65_RS02665 - ROK family transcriptional regulator, at 571,461 to 572,573
_RS02665
DZA65_RS02670: DZA65_RS02670 - hypothetical protein, at 572,633 to 573,520
_RS02670
DZA65_RS02675: DZA65_RS02675 - Gfo/Idh/MocA family oxidoreductase, at 573,823 to 574,974
_RS02675
DZA65_RS02680: DZA65_RS02680 - heavy metal translocating P-type ATPase, at 575,115 to 577,451
_RS02680
Group
Condition
DZA65
_RS02660
DZA65
_RS02665
DZA65
_RS02670
DZA65
_RS02675
DZA65
_RS02680
control
PDB
-0.1
+0.1
+0.1
+0.1
-1.9
carbon source
M9+glycerol
+0.1
+0.4
+0.3
-0.2
-2.2
control
PDB
-0.1
+0.2
+0.3
+0.1
-1.8
carbon source
M9+glycerol
-0.0
+0.6
+0.6
-0.1
-2.5
control
PDB
+0.1
+0.1
+0.1
+0.1
-1.5
carbon source
M9+glycerol
+0.0
+0.7
+0.6
-0.0
-2.3
carbon source
M9+polygalacturonate
-0.1
-0.2
-0.1
-0.1
-0.2
control
LB
-0.1
+0.0
-0.3
-0.3
+0.0
carbon source
M9+sucrose
+0.0
-0.1
-0.5
+0.0
-0.1
plant
Stem-Upstate
-0.1
+0.3
-0.4
-0.1
-0.2
plant
Atlantic
-0.2
-0.2
-0.1
+0.1
-0.0
plant
Stem-Norland
-0.3
-0.0
-0.4
+0.0
+0.2
control
LB
-0.1
+0.1
-0.2
+0.0
-0.3
stress
1.88mM_PTB
-0.2
+0.1
-0.1
-0.1
-0.2
carbon source
M9+glycerol
+0.0
+0.6
+0.6
-0.1
-1.6
plant
Atlantic
-0.2
-0.0
-0.3
-0.1
+0.2
carbon source
M9+glycerol
-0.1
+0.6
+0.6
+0.0
-1.4
plant
Upstate
-0.0
-0.1
+0.2
+0.0
-0.3
plant
Stem-Upstate
-0.0
+0.3
-0.3
-0.1
-0.1
plant
Atlantic
-0.0
-0.1
-0.3
-0.0
+0.3
plant
Stem-Atlantic
+0.1
+0.0
-0.4
+0.2
+0.0
plant
Stem-Norland
-0.1
-0.1
-0.2
+0.1
+0.3
carbon source
M9+glycerol
+0.1
+0.7
+0.8
-0.1
-1.4
plant
Stem-Atlantic
-0.0
+0.2
-0.2
+0.2
-0.1
plant
Stem-Atlantic
-0.3
+0.0
+0.1
+0.2
+0.3
control
LB
+0.2
+0.1
+0.2
+0.0
-0.3
plant
Stem-Norland
-0.2
+0.1
-0.3
-0.0
+0.6
plant
Stem-Upstate
+0.3
+0.1
-0.1
-0.0
+0.2
plant
Stem-Upstate
-0.3
+0.0
+0.8
-0.0
-0.1
plant
Stem-Upstate
-0.0
+0.2
+0.1
+0.1
+0.2
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