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Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS02645 and DZA65_RS02650 are separated by 53 nucleotides
DZA65_RS02650 and DZA65_RS02655 are separated by 549 nucleotides
DZA65_RS02655 and DZA65_RS02660 are separated by 12 nucleotides
DZA65_RS02660 and DZA65_RS02665 are separated by 34 nucleotides
DZA65_RS02645: DZA65_RS02645 - sugar ABC transporter permease, at 566,922 to 567,794
_RS02645
DZA65_RS02650: DZA65_RS02650 - extracellular solute-binding protein, at 567,848 to 569,176
_RS02650
DZA65_RS02655: DZA65_RS02655 - GNAT family N-acetyltransferase, at 569,726 to 570,328
_RS02655
DZA65_RS02660: DZA65_RS02660 - sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC, at 570,341 to 571,426
_RS02660
DZA65_RS02665: DZA65_RS02665 - ROK family transcriptional regulator, at 571,461 to 572,573
_RS02665
Group
Condition
DZA65
_RS02645
DZA65
_RS02650
DZA65
_RS02655
DZA65
_RS02660
DZA65
_RS02665
plant
Atlantic
-0.1
-0.1
-0.3
-0.2
-0.2
plant
Atlantic
-0.0
-0.1
-0.3
-0.2
-0.2
plant
Upstate
+0.0
-0.1
-0.5
-0.0
-0.2
plant
Atlantic
-0.0
-0.1
-0.4
-0.1
-0.1
plant
Upstate
-0.1
-0.1
-0.4
-0.0
-0.1
plant
Norland
-0.0
-0.1
-0.4
-0.1
-0.1
carbon source
M9+polygalacturonate
-0.0
-0.1
-0.3
-0.1
-0.2
plant
Upstate
-0.0
-0.2
-0.3
+0.0
-0.2
plant
Stem-Norland
-0.1
-0.2
-0.3
-0.2
+0.1
plant
Norland
+0.1
-0.1
-0.4
-0.0
-0.2
plant
Atlantic
-0.1
-0.1
-0.3
-0.0
-0.1
plant
Upstate
-0.1
+0.0
-0.3
-0.1
-0.2
plant
Norland
-0.1
-0.1
-0.2
-0.0
-0.2
carbon source
M9+polygalacturonate
+0.1
-0.1
-0.2
-0.1
-0.2
plant
Norland
+0.1
-0.1
-0.3
+0.0
-0.1
stress
1.88mM_PTB
+0.0
-0.1
-0.2
-0.2
+0.1
plant
Stem-Atlantic
+0.0
+0.2
-0.3
-0.3
+0.0
plant
Stem-Upstate
-0.1
+0.0
-0.2
-0.0
+0.2
control
PDB
+0.1
-0.0
-0.2
-0.1
+0.2
plant
Stem-Upstate
-0.2
+0.1
+0.2
+0.1
-0.0
plant
Stem-Norland
+0.1
+0.1
+0.4
-0.3
-0.0
carbon source
M9+glycerol
-0.1
-0.0
-0.0
+0.0
+0.6
carbon source
M9+glycerol
-0.1
-0.0
+0.0
-0.1
+0.6
plant
Stem-Upstate
-0.0
+0.0
+0.4
-0.0
+0.3
plant
Stem-Upstate
+0.2
+0.2
+0.4
-0.3
+0.0
carbon source
M9+glycerol
+0.1
-0.1
+0.1
+0.1
+0.4
carbon source
M9+glycerol
+0.0
+0.1
-0.1
-0.0
+0.6
carbon source
M9+glycerol
-0.0
+0.0
-0.1
+0.1
+0.7
carbon source
M9+glycerol
-0.1
+0.1
+0.0
+0.0
+0.7
plant
Stem-Upstate
+0.1
+0.1
+0.8
+0.3
+0.1
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