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Gene
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Nearby
Cofit
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS02490 and DZA65_RS02495 are separated by 129 nucleotides
DZA65_RS02495 and DZA65_RS02500 are separated by 15 nucleotides
DZA65_RS02500 and DZA65_RS02505 are separated by 429 nucleotides
DZA65_RS02505 and DZA65_RS02510 are separated by 359 nucleotides
DZA65_RS02490: DZA65_RS02490 - phosphoserine phosphatase, at 535,811 to 536,788
_RS02490
DZA65_RS02495: DZA65_RS02495 - YtjB family periplasmic protein, at 536,918 to 537,598
_RS02495
DZA65_RS02500: DZA65_RS02500 - trans-aconitate 2-methyltransferase, at 537,614 to 538,258
_RS02500
DZA65_RS02505: DZA65_RS02505 - peptide chain release factor 3, at 538,688 to 540,277
_RS02505
DZA65_RS02510: DZA65_RS02510 - molecular chaperone OsmY, at 540,637 to 541,278
_RS02510
Group
Condition
DZA65
_RS02490
DZA65
_RS02495
DZA65
_RS02500
DZA65
_RS02505
DZA65
_RS02510
plant
Stem-Norland
-2.6
-0.2
-0.1
-2.1
-0.1
plant
Stem-Upstate
-2.9
+0.0
+0.0
-2.1
-0.1
plant
Stem-Norland
-2.3
-0.3
-0.2
-2.3
+0.1
plant
Stem-Upstate
-3.2
-0.6
+0.1
-0.8
-0.3
plant
Stem-Atlantic
-2.1
+0.0
-0.1
-2.2
-0.2
plant
Upstate
-2.8
+0.3
+0.0
-2.4
+0.2
plant
Atlantic
-2.7
+0.1
+0.1
-2.0
-0.1
plant
Stem-Atlantic
-2.8
+0.0
+0.0
-1.9
+0.0
plant
Upstate
-2.2
+0.1
-0.0
-2.5
+0.0
plant
Stem-Norland
-1.7
-0.6
-0.0
-2.2
+0.0
plant
Stem-Atlantic
-2.5
+0.2
-0.1
-1.9
-0.2
plant
Atlantic
-2.2
-0.2
+0.1
-2.0
-0.0
plant
Upstate
-2.4
-0.2
-0.0
-1.4
-0.2
plant
Stem-Upstate
-2.6
-0.1
-0.1
-1.3
-0.1
plant
Stem-Atlantic
-2.5
+0.1
-0.1
-1.7
+0.0
plant
Atlantic
-2.1
+0.1
+0.0
-2.1
-0.0
plant
Stem-Atlantic
-2.6
-0.0
+0.0
-1.6
+0.1
plant
Stem-Atlantic
-2.2
-0.2
+0.1
-1.7
-0.0
carbon source
M9+polygalacturonate
-2.5
-0.0
+0.1
-1.5
-0.0
plant
Atlantic
-2.8
+0.2
+0.0
-1.2
-0.1
plant
Stem-Atlantic
-2.2
+0.2
-0.2
-1.5
-0.1
plant
Stem-Norland
-2.0
-0.5
-0.1
-1.1
-0.0
carbon source
M9+sucrose
-2.7
-0.2
-0.1
-0.6
-0.1
plant
Atlantic
-2.7
+0.1
-0.1
-0.7
-0.2
carbon source
M9+starch
-3.0
-0.2
+0.1
-0.2
-0.1
plant
Norland
-2.2
+0.0
-0.0
-1.1
-0.2
plant
Atlantic
-2.2
+0.0
-0.1
-1.0
-0.2
plant
Norland
-2.3
+0.0
-0.0
-1.1
-0.0
plant
Upstate
-2.4
+0.0
+0.1
-1.0
-0.1
carbon source
M9+glycerol
-1.6
-0.3
-0.0
-1.5
+0.2
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